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  5. Seita.7G253000.1

Seita.7G253000.1


Description : 6-4-type photolyase *(UVR3)


Gene families : OG_42_0007733 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0007733_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.7G253000.1
Cluster HCAA Clusters: Cluster_71

Target Alias Description ECC score Gene Family Method Actions
At3g15620 No alias (6-4)DNA photolyase [Source:UniProtKB/Swiss-Prot;Acc:O48652] 0.03 Orthogroups_2024-Update
LOC_Os02g10990 No alias FAD binding domain of DNA photolyase domain containing... 0.03 Orthogroups_2024-Update
Pp1s12_186V6 No alias cryptochrome 1 (photolyase-like) 0.02 Orthogroups_2024-Update
Sobic.004G086300.1 No alias 6-4-type photolyase *(UVR3) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004476 mannose-6-phosphate isomerase activity IEP Predicted GO
MF GO:0004788 thiamine diphosphokinase activity IEP Predicted GO
MF GO:0008194 UDP-glycosyltransferase activity IEP Predicted GO
BP GO:0009229 thiamine diphosphate biosynthetic process IEP Predicted GO
MF GO:0016778 diphosphotransferase activity IEP Predicted GO
MF GO:0016853 isomerase activity IEP Predicted GO
MF GO:0016860 intramolecular oxidoreductase activity IEP Predicted GO
MF GO:0016861 intramolecular oxidoreductase activity, interconverting aldoses and ketoses IEP Predicted GO
MF GO:0030975 thiamine binding IEP Predicted GO
BP GO:0042357 thiamine diphosphate metabolic process IEP Predicted GO
BP GO:0044272 sulfur compound biosynthetic process IEP Predicted GO
BP GO:0072527 pyrimidine-containing compound metabolic process IEP Predicted GO
BP GO:0072528 pyrimidine-containing compound biosynthetic process IEP Predicted GO
MF GO:1901681 sulfur compound binding IEP Predicted GO
InterPro domains Description Start Stop
IPR005101 Cryptochr/Photolyase_FAD-bd 300 496
IPR006050 DNA_photolyase_N 12 173
No external refs found!