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  5. Seita.7G255200.1

Seita.7G255200.1


Description : EC_3.1 hydrolase acting on ester bond & DNA endonuclease *(ENDO)


Gene families : OG_42_0001102 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001102_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.7G255200.1
Cluster HCAA Clusters: Cluster_26

Target Alias Description ECC score Gene Family Method Actions
Sobic.003G087300.1 No alias EC_3.1 hydrolase acting on ester bond & DNA endonuclease *(ENDO) 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA 16Dec
MF GO:0004519 endonuclease activity IEA 16Dec
BP GO:0006308 DNA catabolic process IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0004470 malic enzyme activity IEP Predicted GO
MF GO:0004471 malate dehydrogenase (decarboxylating) (NAD+) activity IEP Predicted GO
MF GO:0005507 copper ion binding IEP Predicted GO
CC GO:0009522 photosystem I IEP Predicted GO
CC GO:0009579 thylakoid IEP Predicted GO
MF GO:0009916 alternative oxidase activity IEP Predicted GO
MF GO:0015267 channel activity IEP Predicted GO
CC GO:0016020 membrane IEP Predicted GO
BP GO:0016226 iron-sulfur cluster assembly IEP Predicted GO
MF GO:0016615 malate dehydrogenase activity IEP Predicted GO
MF GO:0016679 oxidoreductase activity, acting on diphenols and related substances as donors IEP Predicted GO
MF GO:0016682 oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor IEP Predicted GO
MF GO:0022803 passive transmembrane transporter activity IEP Predicted GO
MF GO:0030599 pectinesterase activity IEP Predicted GO
BP GO:0031163 metallo-sulfur cluster assembly IEP Predicted GO
MF GO:0031625 ubiquitin protein ligase binding IEP Predicted GO
BP GO:0042545 cell wall modification IEP Predicted GO
MF GO:0044389 ubiquitin-like protein ligase binding IEP Predicted GO
BP GO:0045229 external encapsulating structure organization IEP Predicted GO
MF GO:0052689 carboxylic ester hydrolase activity IEP Predicted GO
BP GO:0071554 cell wall organization or biogenesis IEP Predicted GO
BP GO:0071555 cell wall organization IEP Predicted GO
InterPro domains Description Start Stop
IPR003154 S1/P1nuclease 34 299
No external refs found!