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  5. Seita.7G259800.1

Seita.7G259800.1


Description : cyclic nucleotide-gated cation channel *(CNGC)


Gene families : OG_42_0000108 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000108_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.7G259800.1
Cluster HCAA Clusters: Cluster_179

Target Alias Description ECC score Gene Family Method Actions
A4A49_17367 No alias cyclic nucleotide-gated ion channel 1 0.03 Orthogroups_2024-Update
At4g30560 No alias Putative cyclic nucleotide-gated ion channel 9... 0.01 Orthogroups_2024-Update
Bradi1g46260 No alias cyclic nucleotide-binding transporter 1 0.01 Orthogroups_2024-Update
Bradi3g57510 No alias cyclic nucleotide-binding transporter 1 0.03 Orthogroups_2024-Update
Bradi4g37740 No alias cyclic nucleotide-gated channel 14 0.02 Orthogroups_2024-Update
Brara.J01954.1 No alias temperature sensor protein *(CNGC2) & cyclic... 0.03 Orthogroups_2024-Update
GRMZM2G135651 No alias cyclic nucleotide-gated channel 17 0.03 Orthogroups_2024-Update
Glyma.06G223800 No alias cyclic nucleotide-gated channel 17 0.02 Orthogroups_2024-Update
HORVU6Hr1G079040.7 No alias cyclic nucleotide-gated cation channel *(CNGC) 0.03 Orthogroups_2024-Update
HORVU6Hr1G083790.3 No alias cyclic nucleotide-gated cation channel *(CNGC) 0.03 Orthogroups_2024-Update
LOC_Os05g42250 No alias cyclic nucleotide-gated ion channel 2, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os06g08850 No alias cyclic nucleotide-gated ion channel 14, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os09g38580 No alias cyclic nucleotide-gated ion channel, putative, expressed 0.03 Orthogroups_2024-Update
MA_25248g0010 No alias (at1g15990 : 431.0) member of Cyclic nucleotide gated... 0.02 Orthogroups_2024-Update
Potri.012G038700 No alias cyclic nucleotide-binding transporter 1 0.02 Orthogroups_2024-Update
Potri.015G033900 No alias cyclic nucleotide-binding transporter 1 0.03 Orthogroups_2024-Update
Sobic.002G294800.1 No alias cyclic nucleotide-gated cation channel *(CNGC) 0.03 Orthogroups_2024-Update
Sobic.006G237400.1 No alias cyclic nucleotide-gated cation channel *(CNGC) 0.03 Orthogroups_2024-Update
Solyc07g006510 No alias Cyclic nucleotide-gated channel (AHRD V3.3 *** A0A0K9PRG4_ZOSMR) 0.02 Orthogroups_2024-Update
Sopen12g001370 No alias Cyclic nucleotide-binding domain 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005216 ion channel activity IEA 16Dec
BP GO:0006811 ion transport IEA 16Dec
CC GO:0016020 membrane IEA 16Dec
BP GO:0055085 transmembrane transport IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0000030 mannosyltransferase activity IEP Predicted GO
CC GO:0005783 endoplasmic reticulum IEP Predicted GO
CC GO:0005789 endoplasmic reticulum membrane IEP Predicted GO
BP GO:0006605 protein targeting IEP Predicted GO
BP GO:0006612 protein targeting to membrane IEP Predicted GO
BP GO:0006613 cotranslational protein targeting to membrane IEP Predicted GO
BP GO:0006614 SRP-dependent cotranslational protein targeting to membrane IEP Predicted GO
BP GO:0006886 intracellular protein transport IEP Predicted GO
BP GO:0007062 sister chromatid cohesion IEP Predicted GO
BP GO:0007064 mitotic sister chromatid cohesion IEP Predicted GO
BP GO:0007186 G protein-coupled receptor signaling pathway IEP Predicted GO
BP GO:0008104 protein localization IEP Predicted GO
MF GO:0008312 7S RNA binding IEP Predicted GO
BP GO:0009966 regulation of signal transduction IEP Predicted GO
BP GO:0010646 regulation of cell communication IEP Predicted GO
BP GO:0015031 protein transport IEP Predicted GO
BP GO:0015833 peptide transport IEP Predicted GO
BP GO:0016192 vesicle-mediated transport IEP Predicted GO
BP GO:0022402 cell cycle process IEP Predicted GO
BP GO:0023051 regulation of signaling IEP Predicted GO
CC GO:0030119 AP-type membrane coat adaptor complex IEP Predicted GO
CC GO:0030131 clathrin adaptor complex IEP Predicted GO
MF GO:0031683 G-protein beta/gamma-subunit complex binding IEP Predicted GO
BP GO:0032012 regulation of ARF protein signal transduction IEP Predicted GO
MF GO:0032182 ubiquitin-like protein binding IEP Predicted GO
BP GO:0033036 macromolecule localization IEP Predicted GO
BP GO:0042886 amide transport IEP Predicted GO
MF GO:0043130 ubiquitin binding IEP Predicted GO
CC GO:0044444 cytoplasmic part IEP Predicted GO
BP GO:0045047 protein targeting to ER IEP Predicted GO
BP GO:0045184 establishment of protein localization IEP Predicted GO
BP GO:0046578 regulation of Ras protein signal transduction IEP Predicted GO
BP GO:0046907 intracellular transport IEP Predicted GO
CC GO:0048500 signal recognition particle IEP Predicted GO
BP GO:0051056 regulation of small GTPase mediated signal transduction IEP Predicted GO
BP GO:0051641 cellular localization IEP Predicted GO
BP GO:0051649 establishment of localization in cell IEP Predicted GO
BP GO:0070972 protein localization to endoplasmic reticulum IEP Predicted GO
BP GO:0071702 organic substance transport IEP Predicted GO
BP GO:0071705 nitrogen compound transport IEP Predicted GO
BP GO:0072599 establishment of protein localization to endoplasmic reticulum IEP Predicted GO
BP GO:1902531 regulation of intracellular signal transduction IEP Predicted GO
BP GO:1903047 mitotic cell cycle process IEP Predicted GO
InterPro domains Description Start Stop
IPR000595 cNMP-bd_dom 526 615
IPR005821 Ion_trans_dom 107 430
No external refs found!