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  5. Seita.7G263400.1

Seita.7G263400.1


Description : Unknown function


Gene families : OG_42_0000205 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000205_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.7G263400.1
Cluster HCAA Clusters: Cluster_294

Target Alias Description ECC score Gene Family Method Actions
Bradi3g20141 No alias F-box/RNI-like/FBD-like domains-containing protein 0.03 Orthogroups_2024-Update
Bradi4g44736 No alias F-box/RNI-like superfamily protein 0.03 Orthogroups_2024-Update
HORVU2Hr1G124770.3 No alias Unknown function 0.02 Orthogroups_2024-Update
HORVU5Hr1G044920.1 No alias Unknown function 0.03 Orthogroups_2024-Update
HORVU5Hr1G074590.2 No alias Unknown function 0.04 Orthogroups_2024-Update
LOC_Os03g50470 No alias expressed protein 0.03 Orthogroups_2024-Update
LOC_Os06g10290 No alias OsFBX191 - F-box domain containing protein, expressed 0.02 Orthogroups_2024-Update
Seita.1G042200.1 No alias elicitor peptide precursor *(proPEP)) 0.03 Orthogroups_2024-Update
Seita.2G063200.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Seita.4G087100.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Seita.6G009700.1 No alias Unknown function 0.01 Orthogroups_2024-Update
Seita.8G003500.1 No alias Unknown function 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000347 THO complex IEP Predicted GO
CC GO:0000445 THO complex part of transcription export complex IEP Predicted GO
MF GO:0005507 copper ion binding IEP Predicted GO
MF GO:0008234 cysteine-type peptidase activity IEP Predicted GO
BP GO:0009116 nucleoside metabolic process IEP Predicted GO
BP GO:0019321 pentose metabolic process IEP Predicted GO
BP GO:0019566 arabinose metabolic process IEP Predicted GO
BP GO:0046373 L-arabinose metabolic process IEP Predicted GO
MF GO:0046556 alpha-L-arabinofuranosidase activity IEP Predicted GO
BP GO:1901657 glycosyl compound metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR006566 FBD 86 120
No external refs found!