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  5. At4g33260

At4g33260


Description : Cell division cycle 20.2, cofactor of APC complex [Source:UniProtKB/Swiss-Prot;Acc:Q9S7I8]


Gene families : OG_42_0000946 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000946_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Arabidopsis release: At4g33260
Cluster HCCA clusters: Cluster_95

Target Alias Description ECC score Gene Family Method Actions
A4A49_23682 No alias cell division cycle 20.1, cofactor of apc complex 0.04 Orthogroups_2024-Update
Brara.A00467.1 No alias substrate specificity component *(CDC20) of APC/C E3... 0.12 Orthogroups_2024-Update
Brara.K00557.1 No alias Unknown function 0.06 Orthogroups_2024-Update
Cre09.g399911 No alias Transducin family protein / WD-40 repeat family protein 0.01 Orthogroups_2024-Update
Glyma.01G229600 No alias Transducin family protein / WD-40 repeat family protein 0.1 Orthogroups_2024-Update
Glyma.11G012400 No alias Transducin family protein / WD-40 repeat family protein 0.09 Orthogroups_2024-Update
Sobic.004G270800.3 No alias substrate specificity component *(CDC20) of APC/C E3... 0.02 Orthogroups_2024-Update
Solyc03g096870 No alias cell division control 20-1 0.05 Orthogroups_2024-Update
Solyc06g072830 No alias WD40 repeat-containing protein (AHRD V3.3 *** A0A103YEC3_CYNCS) 0.12 Orthogroups_2024-Update
Sopen06g029210 No alias WD domain, G-beta repeat 0.07 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Predicted GO
MF GO:0004175 endopeptidase activity IEP Predicted GO
MF GO:0004222 metalloendopeptidase activity IEP Predicted GO
MF GO:0004827 proline-tRNA ligase activity IEP Predicted GO
MF GO:0005524 ATP binding IEP Predicted GO
BP GO:0006298 mismatch repair IEP Predicted GO
BP GO:0006399 tRNA metabolic process IEP Predicted GO
BP GO:0006433 prolyl-tRNA aminoacylation IEP Predicted GO
BP GO:0006508 proteolysis IEP Predicted GO
BP GO:0007034 vacuolar transport IEP Predicted GO
MF GO:0008144 drug binding IEP Predicted GO
MF GO:0008233 peptidase activity IEP Predicted GO
MF GO:0008237 metallopeptidase activity IEP Predicted GO
MF GO:0008483 transaminase activity IEP Predicted GO
MF GO:0009982 pseudouridine synthase activity IEP Predicted GO
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP Predicted GO
MF GO:0016874 ligase activity IEP Predicted GO
MF GO:0017076 purine nucleotide binding IEP Predicted GO
MF GO:0017150 tRNA dihydrouridine synthase activity IEP Predicted GO
MF GO:0019842 vitamin binding IEP Predicted GO
MF GO:0030170 pyridoxal phosphate binding IEP Predicted GO
MF GO:0030554 adenyl nucleotide binding IEP Predicted GO
MF GO:0030983 mismatched DNA binding IEP Predicted GO
MF GO:0032553 ribonucleotide binding IEP Predicted GO
MF GO:0032555 purine ribonucleotide binding IEP Predicted GO
MF GO:0032559 adenyl ribonucleotide binding IEP Predicted GO
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Predicted GO
MF GO:0036094 small molecule binding IEP Predicted GO
MF GO:0043167 ion binding IEP Predicted GO
MF GO:0043168 anion binding IEP Predicted GO
BP GO:0043170 macromolecule metabolic process IEP Predicted GO
MF GO:0050662 coenzyme binding IEP Predicted GO
MF GO:0070011 peptidase activity, acting on L-amino acid peptides IEP Predicted GO
MF GO:0070279 vitamin B6 binding IEP Predicted GO
MF GO:0097367 carbohydrate derivative binding IEP Predicted GO
MF GO:0140096 catalytic activity, acting on a protein IEP Predicted GO
MF GO:0140101 catalytic activity, acting on a tRNA IEP Predicted GO
MF GO:1901265 nucleoside phosphate binding IEP Predicted GO
InterPro domains Description Start Stop
IPR001680 WD40_repeat 385 420
IPR001680 WD40_repeat 250 284
IPR001680 WD40_repeat 297 335
IPR024977 Apc4_WD40_dom 167 225
No external refs found!