Seita.7G276300.1

Description : stabilization factor *(SGS3) of transacting siRNA pathway

Gene families : OG_42_0001275 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001275_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Setaria italica: Seita.7G276300.1
Cluster	HCAA Clusters: Cluster_36

Target	Alias	Description	ECC score	Gene Family Method	Actions
PSME_00009180-RA	No alias	(at5g23570 : 140.0) Required for posttranscriptional...	0.03	Orthogroups_2024-Update
PSME_00010089-RA	No alias	(at5g23570 : 423.0) Required for posttranscriptional...	0.02	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009892	negative regulation of metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010605	negative regulation of macromolecule metabolic process	None	Extended
BP	GO:0010629	negative regulation of gene expression	None	Extended
BP	GO:0016458	gene silencing	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031047	gene silencing by RNA	IEA	16Dec
BP	GO:0048519	negative regulation of biological process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0004519	endonuclease activity	IEP	Predicted GO
MF	GO:0005085	guanyl-nucleotide exchange factor activity	IEP	Predicted GO
BP	GO:0006308	DNA catabolic process	IEP	Predicted GO
MF	GO:0051020	GTPase binding	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR005381	Znf-XS_domain	197	222
IPR005380	XS_domain	248	341

External Links

No external refs found!