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  5. Seita.7G289100.1

Seita.7G289100.1


Description : component *(eIF3i) of eIF3 mRNA-to-PIC binding complex


Gene families : OG_42_0003958 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0003958_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.7G289100.1
Cluster HCAA Clusters: Cluster_216

Target Alias Description ECC score Gene Family Method Actions
Bradi4g14097 No alias Transducin/WD40 repeat-like superfamily protein 0.04 Orthogroups_2024-Update
Cre03.g194400 No alias Transducin/WD40 repeat-like superfamily protein 0.01 Orthogroups_2024-Update
Sopen11g009060 No alias WD domain, G-beta repeat 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0004518 nuclease activity IEP Predicted GO
MF GO:0004519 endonuclease activity IEP Predicted GO
BP GO:0006364 rRNA processing IEP Predicted GO
BP GO:0006396 RNA processing IEP Predicted GO
BP GO:0006886 intracellular protein transport IEP Predicted GO
BP GO:0008104 protein localization IEP Predicted GO
BP GO:0015031 protein transport IEP Predicted GO
BP GO:0015833 peptide transport IEP Predicted GO
BP GO:0016072 rRNA metabolic process IEP Predicted GO
MF GO:0019899 enzyme binding IEP Predicted GO
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Predicted GO
MF GO:0031267 small GTPase binding IEP Predicted GO
BP GO:0033036 macromolecule localization IEP Predicted GO
BP GO:0034470 ncRNA processing IEP Predicted GO
BP GO:0034660 ncRNA metabolic process IEP Predicted GO
BP GO:0042254 ribosome biogenesis IEP Predicted GO
BP GO:0042886 amide transport IEP Predicted GO
BP GO:0044085 cellular component biogenesis IEP Predicted GO
CC GO:0044424 intracellular part IEP Predicted GO
CC GO:0044445 cytosolic part IEP Predicted GO
CC GO:0044464 cell part IEP Predicted GO
BP GO:0045184 establishment of protein localization IEP Predicted GO
BP GO:0046907 intracellular transport IEP Predicted GO
MF GO:0051020 GTPase binding IEP Predicted GO
BP GO:0051641 cellular localization IEP Predicted GO
BP GO:0051649 establishment of localization in cell IEP Predicted GO
CC GO:0061695 transferase complex, transferring phosphorus-containing groups IEP Predicted GO
BP GO:0071702 organic substance transport IEP Predicted GO
BP GO:0071705 nitrogen compound transport IEP Predicted GO
CC GO:0090730 Las1 complex IEP Predicted GO
CC GO:1902494 catalytic complex IEP Predicted GO
CC GO:1902555 endoribonuclease complex IEP Predicted GO
CC GO:1902911 protein kinase complex IEP Predicted GO
CC GO:1905348 endonuclease complex IEP Predicted GO
CC GO:1905354 exoribonuclease complex IEP Predicted GO
CC GO:1990234 transferase complex IEP Predicted GO
InterPro domains Description Start Stop
IPR001680 WD40_repeat 97 134
IPR001680 WD40_repeat 61 91
IPR001680 WD40_repeat 197 228
No external refs found!