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  5. Seita.7G302100.1

Seita.7G302100.1


Description : Unknown function


Gene families : OG_42_0008145 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0008145_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.7G302100.1
Cluster HCAA Clusters: Cluster_23

Target Alias Description ECC score Gene Family Method Actions
79843 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 Orthogroups_2024-Update
Bradi3g21093 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.03 Orthogroups_2024-Update
Glyma.20G014500 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.03 Orthogroups_2024-Update
MA_10430089g0010 No alias (at5g01110 : 355.0) Tetratricopeptide repeat (TPR)-like... 0.02 Orthogroups_2024-Update
Seita.8G012900.1 No alias Unknown function 0.09 Orthogroups_2024-Update
Sobic.001G267500.1 No alias Unknown function 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004601 peroxidase activity IEP Predicted GO
BP GO:0006979 response to oxidative stress IEP Predicted GO
MF GO:0016209 antioxidant activity IEP Predicted GO
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP Predicted GO
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 538 567
IPR002885 Pentatricopeptide_repeat 503 532
IPR002885 Pentatricopeptide_repeat 639 688
IPR002885 Pentatricopeptide_repeat 569 618
IPR002885 Pentatricopeptide_repeat 431 479
IPR002885 Pentatricopeptide_repeat 330 373
IPR002885 Pentatricopeptide_repeat 259 308
IPR002885 Pentatricopeptide_repeat 195 231
IPR002885 Pentatricopeptide_repeat 705 723
No external refs found!