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  5. Seita.7G317900.1

Seita.7G317900.1


Description : Unknown function


Gene families : OG_42_0000043 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000043_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.7G317900.1
Cluster HCAA Clusters: Cluster_24

Target Alias Description ECC score Gene Family Method Actions
At1g14200 No alias At1g14200 [Source:UniProtKB/TrEMBL;Acc:Q9XI67] 0.03 Orthogroups_2024-Update
Brara.G02768.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Cre10.g422050 No alias RING/U-box superfamily protein 0.02 Orthogroups_2024-Update
GRMZM2G157855 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
Glyma.02G108300 No alias RING/U-box superfamily protein 0.02 Orthogroups_2024-Update
HORVU6Hr1G034800.1 No alias Unknown function 0.02 Orthogroups_2024-Update
MA_474338g0010 No alias (at2g39720 : 83.2) Encodes a putative RING-H2 finger... 0.05 Orthogroups_2024-Update
Solyc01g009000 No alias RING/U-box superfamily protein (AHRD V3.3 *** AT3G56580.3) 0.04 Orthogroups_2024-Update
Solyc10g045180 No alias E3 ubiquitin-protein ligase (AHRD V3.3 --* A0A0F7G5V7_9ROSI) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004852 uroporphyrinogen-III synthase activity IEP Predicted GO
MF GO:0008234 cysteine-type peptidase activity IEP Predicted GO
MF GO:0008519 ammonium transmembrane transporter activity IEP Predicted GO
BP GO:0015696 ammonium transport IEP Predicted GO
MF GO:0016836 hydro-lyase activity IEP Predicted GO
BP GO:0032502 developmental process IEP Predicted GO
BP GO:0033013 tetrapyrrole metabolic process IEP Predicted GO
BP GO:0033014 tetrapyrrole biosynthetic process IEP Predicted GO
BP GO:0048364 root development IEP Predicted GO
BP GO:0048367 shoot system development IEP Predicted GO
BP GO:0048731 system development IEP Predicted GO
BP GO:0048856 anatomical structure development IEP Predicted GO
BP GO:0072488 ammonium transmembrane transport IEP Predicted GO
BP GO:0099402 plant organ development IEP Predicted GO
InterPro domains Description Start Stop
IPR001841 Znf_RING 63 104
No external refs found!