Description : Unknown function
Gene families : OG_42_0000001 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Setaria italica: Seita.7G329200.1 | |
Cluster | HCAA Clusters: Cluster_330 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
A4A49_13653 | No alias | pentatricopeptide repeat-containing protein | 0.03 | Orthogroups_2024-Update | |
At4g14170 | No alias | Pentatricopeptide repeat-containing protein At4g14170... | 0.03 | Orthogroups_2024-Update | |
Bradi1g36010 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.06 | Orthogroups_2024-Update | |
Bradi1g53600 | No alias | pentatricopeptide (PPR) repeat-containing protein | 0.04 | Orthogroups_2024-Update | |
Bradi2g62320 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.02 | Orthogroups_2024-Update | |
Bradi4g10130 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.06 | Orthogroups_2024-Update | |
Brara.F00415.1 | No alias | Unknown function | 0.02 | Orthogroups_2024-Update | |
GRMZM2G019689 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.02 | Orthogroups_2024-Update | |
GRMZM2G060536 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.02 | Orthogroups_2024-Update | |
GRMZM2G144843 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.03 | Orthogroups_2024-Update | |
GRMZM2G168378 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.03 | Orthogroups_2024-Update | |
GRMZM2G430710 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.02 | Orthogroups_2024-Update | |
GRMZM2G456114 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.02 | Orthogroups_2024-Update | |
GRMZM5G862936 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.02 | Orthogroups_2024-Update | |
Glyma.01G159100 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.02 | Orthogroups_2024-Update | |
Glyma.04G129100 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.02 | Orthogroups_2024-Update | |
Glyma.13G240000 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.02 | Orthogroups_2024-Update | |
Glyma.15G272100 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.04 | Orthogroups_2024-Update | |
HORVU3Hr1G085150.2 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
HORVU4Hr1G080660.1 | No alias | Unknown function | 0.04 | Orthogroups_2024-Update | |
Sobic.003G142400.2 | No alias | RNA editing factor *(PGN) | 0.03 | Orthogroups_2024-Update | |
Sobic.003G380100.2 | No alias | Unknown function | 0.08 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0008270 | zinc ion binding | IEA | 16Dec |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0000075 | cell cycle checkpoint | IEP | Predicted GO |
BP | GO:0000077 | DNA damage checkpoint | IEP | Predicted GO |
BP | GO:0006974 | cellular response to DNA damage stimulus | IEP | Predicted GO |
CC | GO:0030896 | checkpoint clamp complex | IEP | Predicted GO |
BP | GO:0031570 | DNA integrity checkpoint | IEP | Predicted GO |
BP | GO:0033554 | cellular response to stress | IEP | Predicted GO |
CC | GO:0044427 | chromosomal part | IEP | Predicted GO |
CC | GO:0044428 | nuclear part | IEP | Predicted GO |
CC | GO:0044454 | nuclear chromosome part | IEP | Predicted GO |
BP | GO:0045786 | negative regulation of cell cycle | IEP | Predicted GO |
BP | GO:0048519 | negative regulation of biological process | IEP | Predicted GO |
BP | GO:0048523 | negative regulation of cellular process | IEP | Predicted GO |
BP | GO:0051716 | cellular response to stimulus | IEP | Predicted GO |
BP | GO:0051726 | regulation of cell cycle | IEP | Predicted GO |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR002885 | Pentatricopeptide_repeat | 318 | 344 |
IPR002885 | Pentatricopeptide_repeat | 144 | 165 |
IPR002885 | Pentatricopeptide_repeat | 116 | 139 |
IPR002885 | Pentatricopeptide_repeat | 245 | 273 |
IPR002885 | Pentatricopeptide_repeat | 418 | 443 |
IPR002885 | Pentatricopeptide_repeat | 347 | 375 |
IPR002885 | Pentatricopeptide_repeat | 217 | 242 |
IPR032867 | DYW_dom | 559 | 651 |
No external refs found! |