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  5. Seita.7G333600.1

Seita.7G333600.1


Description : pre-60S ribosomal-subunit proteome nuclear export factor *(MRT4)


Gene families : OG_42_0004618 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0004618_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.7G333600.1
Cluster HCAA Clusters: Cluster_45

Target Alias Description ECC score Gene Family Method Actions
Bradi4g44960 No alias Ribosomal protein L10 family protein 0.04 Orthogroups_2024-Update
Brara.G00884.1 No alias pre-60S ribosomal-subunit proteome nuclear export factor *(MRT4) 0.03 Orthogroups_2024-Update
Cre06.g261700 No alias Ribosomal protein L10 family protein 0.02 Orthogroups_2024-Update
GRMZM2G109133 No alias Ribosomal protein L10 family protein 0.03 Orthogroups_2024-Update
Glyma.08G184300 No alias Ribosomal protein L10 family protein 0.04 Orthogroups_2024-Update
LOC_Os12g01430 No alias ribosomal protein L10, putative, expressed 0.02 Orthogroups_2024-Update
Potri.001G460100 No alias Ribosomal protein L10 family protein 0.02 Orthogroups_2024-Update
Potri.011G156300 No alias Ribosomal protein L10 family protein 0.02 Orthogroups_2024-Update
Sobic.005G003800.1 No alias pre-60S ribosomal-subunit proteome nuclear export factor *(MRT4) 0.04 Orthogroups_2024-Update
Sopen01g046970 No alias hypothetical protein 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP Predicted GO
BP GO:0001522 pseudouridine synthesis IEP Predicted GO
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP Predicted GO
MF GO:0003779 actin binding IEP Predicted GO
MF GO:0004540 ribonuclease activity IEP Predicted GO
CC GO:0005730 nucleolus IEP Predicted GO
BP GO:0006139 nucleobase-containing compound metabolic process IEP Predicted GO
BP GO:0006364 rRNA processing IEP Predicted GO
BP GO:0006396 RNA processing IEP Predicted GO
BP GO:0006725 cellular aromatic compound metabolic process IEP Predicted GO
BP GO:0009451 RNA modification IEP Predicted GO
BP GO:0016070 RNA metabolic process IEP Predicted GO
BP GO:0016072 rRNA metabolic process IEP Predicted GO
MF GO:0016853 isomerase activity IEP Predicted GO
MF GO:0016859 cis-trans isomerase activity IEP Predicted GO
BP GO:0018193 peptidyl-amino acid modification IEP Predicted GO
BP GO:0018208 peptidyl-proline modification IEP Predicted GO
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Predicted GO
BP GO:0034470 ncRNA processing IEP Predicted GO
BP GO:0034641 cellular nitrogen compound metabolic process IEP Predicted GO
BP GO:0042254 ribosome biogenesis IEP Predicted GO
MF GO:0042910 xenobiotic transmembrane transporter activity IEP Predicted GO
BP GO:0043170 macromolecule metabolic process IEP Predicted GO
BP GO:0044085 cellular component biogenesis IEP Predicted GO
BP GO:0046483 heterocycle metabolic process IEP Predicted GO
BP GO:0090304 nucleic acid metabolic process IEP Predicted GO
BP GO:1901360 organic cyclic compound metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR001790 Ribosomal_L10P 22 121
No external refs found!