1. Home
  2. Species
  3. Setaria italica
  4. Sequence
  5. Seita.8G002700.1

Seita.8G002700.1


Description : delta-12/delta-15 fatty acid desaturase


Gene families : OG_42_0001432 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001432_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.8G002700.1
Cluster HCAA Clusters: Cluster_68

Target Alias Description ECC score Gene Family Method Actions
At2g29980 No alias FAD3 [Source:UniProtKB/TrEMBL;Acc:A0A178VX43] 0.02 Orthogroups_2024-Update
Glyma.18G202600 No alias fatty acid desaturase 8 0.03 Orthogroups_2024-Update
HORVU5Hr1G048240.5 No alias delta-12/delta-15 fatty acid desaturase 0.03 Orthogroups_2024-Update
Mp5g20700.1 No alias omega-3/omega-6 fatty acid desaturase 0.02 Orthogroups_2024-Update
Potri.006G101500 No alias fatty acid desaturase 8 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0006629 lipid metabolic process IEA 16Dec
MF GO:0016717 oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water IEA 16Dec
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004045 aminoacyl-tRNA hydrolase activity IEP Predicted GO
MF GO:0004497 monooxygenase activity IEP Predicted GO
MF GO:0004499 N,N-dimethylaniline monooxygenase activity IEP Predicted GO
MF GO:0005244 voltage-gated ion channel activity IEP Predicted GO
MF GO:0005247 voltage-gated chloride channel activity IEP Predicted GO
MF GO:0005253 anion channel activity IEP Predicted GO
MF GO:0005254 chloride channel activity IEP Predicted GO
MF GO:0005506 iron ion binding IEP Predicted GO
BP GO:0006821 chloride transport IEP Predicted GO
BP GO:0007165 signal transduction IEP Predicted GO
MF GO:0008308 voltage-gated anion channel activity IEP Predicted GO
MF GO:0008509 anion transmembrane transporter activity IEP Predicted GO
MF GO:0015103 inorganic anion transmembrane transporter activity IEP Predicted GO
MF GO:0015108 chloride transmembrane transporter activity IEP Predicted GO
BP GO:0015698 inorganic anion transport IEP Predicted GO
MF GO:0016409 palmitoyltransferase activity IEP Predicted GO
MF GO:0016709 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen IEP Predicted GO
MF GO:0022832 voltage-gated channel activity IEP Predicted GO
MF GO:0051087 chaperone binding IEP Predicted GO
MF GO:0097159 organic cyclic compound binding IEP Predicted GO
MF GO:1901363 heterocyclic compound binding IEP Predicted GO
InterPro domains Description Start Stop
IPR005804 FA_desaturase_dom 95 348
IPR021863 FAS_N 27 86
No external refs found!