Seita.8G003600.1

Description : Unknown function

Gene families : OG_42_0000589 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000589_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Setaria italica: Seita.8G003600.1
Cluster	HCAA Clusters: Cluster_279

Target	Alias	Description	ECC score	Gene Family Method
A4A49_15979	No alias	hypothetical protein	0.03	Orthogroups_2024-Update
Glyma.06G092800	No alias	Rhamnogalacturonate lyase family protein	0.02	Orthogroups_2024-Update
MA_10429122g0010	No alias	(at1g09910 : 290.0) Rhamnogalacturonate lyase family...	0.02	Orthogroups_2024-Update
Seita.7G310700.1	No alias	Unknown function	0.02	Orthogroups_2024-Update
Sopen04g030360	No alias	Rhamnogalacturonate lyase family	0.02	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
No GO annotation available for this sequence

Type	GO Term	Name	Evidence	Source
BP	GO:0000041	transition metal ion transport	IEP	Predicted GO
MF	GO:0003905	alkylbase DNA N-glycosylase activity	IEP	Predicted GO
MF	GO:0005375	copper ion transmembrane transporter activity	IEP	Predicted GO
CC	GO:0005811	lipid droplet	IEP	Predicted GO
BP	GO:0006825	copper ion transport	IEP	Predicted GO
MF	GO:0008725	DNA-3-methyladenine glycosylase activity	IEP	Predicted GO
CC	GO:0012511	monolayer-surrounded lipid storage body	IEP	Predicted GO
MF	GO:0019104	DNA N-glycosylase activity	IEP	Predicted GO
BP	GO:0035434	copper ion transmembrane transport	IEP	Predicted GO
MF	GO:0043733	DNA-3-methylbase glycosylase activity	IEP	Predicted GO
MF	GO:0046915	transition metal ion transmembrane transporter activity	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR010325	Rhamnogal_lyase	2	131
IPR029413	RG-lyase_II	287	359

External Links

No external refs found!