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  5. Seita.8G007700.1

Seita.8G007700.1


Description : component *(uS9) of small ribosomal-subunit (SSU) proteome


Gene families : OG_42_0002098 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002098_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.8G007700.1
Cluster HCAA Clusters: Cluster_75

Target Alias Description ECC score Gene Family Method Actions
138369 No alias Ribosomal protein S5 domain 2-like superfamily protein 0.03 Orthogroups_2024-Update
A4A49_19998 No alias 40s ribosomal protein s16 0.02 Orthogroups_2024-Update
Brara.A03778.1 No alias component *(uS9) of small ribosomal-subunit (SSU) proteome 0.03 Orthogroups_2024-Update
Brara.E03459.1 No alias component *(uS9) of small ribosomal-subunit (SSU) proteome 0.02 Orthogroups_2024-Update
GRMZM2G353103 No alias Ribosomal protein S5 domain 2-like superfamily protein 0.03 Orthogroups_2024-Update
Glyma.02G103600 No alias Ribosomal protein S5 domain 2-like superfamily protein 0.07 Orthogroups_2024-Update
Glyma.05G241200 No alias Ribosomal protein S5 domain 2-like superfamily protein 0.05 Orthogroups_2024-Update
Glyma.08G048200 No alias Ribosomal protein S5 domain 2-like superfamily protein 0.03 Orthogroups_2024-Update
HORVU4Hr1G023570.2 No alias component *(uS9) of small ribosomal-subunit (SSU) proteome 0.02 Orthogroups_2024-Update
HORVU5Hr1G045620.1 No alias component *(uS9) of small ribosomal-subunit (SSU) proteome 0.04 Orthogroups_2024-Update
Kfl00461_0050 kfl00461_0050_v1.1 (p46293|rs16_goshi : 254.0) 40S ribosomal protein S16 -... 0.01 Orthogroups_2024-Update
Mp1g14290.1 No alias component RPS16 of SSU proteome 0.02 Orthogroups_2024-Update
Potri.001G304700 No alias Ribosomal protein S5 domain 2-like superfamily protein 0.02 Orthogroups_2024-Update
Pp1s17_377V6 No alias 40s ribosomal protein s16 0.02 Orthogroups_2024-Update
Pp1s199_17V6 No alias 40s ribosomal protein s16 0.02 Orthogroups_2024-Update
Pp1s228_28V6 No alias 40s ribosomal protein s16 0.02 Orthogroups_2024-Update
Sobic.005G019700.1 No alias component *(uS9) of small ribosomal-subunit (SSU) proteome 0.04 Orthogroups_2024-Update
Sobic.008G021100.1 No alias component *(uS9) of small ribosomal-subunit (SSU) proteome 0.04 Orthogroups_2024-Update
Solyc05g005690 No alias Ribosomal protein S9, putative (AHRD V3.3 *** B9RYF4_RICCO) 0.02 Orthogroups_2024-Update
Sopen04g014030 No alias Ribosomal protein S9/S16 0.04 Orthogroups_2024-Update
evm.model.contig_435.17 No alias (at2g09990 : 160.0) Ribosomal protein S5 domain 2-like... 0.04 Orthogroups_2024-Update
evm.model.tig00000123.14 No alias (at2g09990 : 175.0) Ribosomal protein S5 domain 2-like... 0.06 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA 16Dec
CC GO:0005840 ribosome IEA 16Dec
BP GO:0006412 translation IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP Predicted GO
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP Predicted GO
MF GO:0051287 NAD binding IEP Predicted GO
InterPro domains Description Start Stop
IPR000754 Ribosomal_S9 17 149
No external refs found!