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  5. Seita.8G012300.1

Seita.8G012300.1


Description : endo-beta-1,4-mannanase


Gene families : OG_42_0000309 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000309_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.8G012300.1
Cluster HCAA Clusters: Cluster_90

Target Alias Description ECC score Gene Family Method Actions
Brara.J00092.1 No alias endo-beta-1,4-mannanase 0.05 Orthogroups_2024-Update
Glyma.06G292400 No alias Glycosyl hydrolase superfamily protein 0.06 Orthogroups_2024-Update
MA_6558g0010 No alias (at5g01930 : 532.0) Glycosyl hydrolase superfamily... 0.02 Orthogroups_2024-Update
MA_69814g0010 No alias (at5g66460 : 437.0) Glycosyl hydrolase superfamily... 0.02 Orthogroups_2024-Update
Pp1s5_225V6 No alias hydrolyzing o-glycosyl 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEA 16Dec
BP GO:0071704 organic substance metabolic process IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP Predicted GO
BP GO:0006355 regulation of transcription, DNA-templated IEP Predicted GO
BP GO:0009889 regulation of biosynthetic process IEP Predicted GO
BP GO:0010468 regulation of gene expression IEP Predicted GO
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Predicted GO
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Predicted GO
BP GO:0019222 regulation of metabolic process IEP Predicted GO
BP GO:0031323 regulation of cellular metabolic process IEP Predicted GO
BP GO:0031326 regulation of cellular biosynthetic process IEP Predicted GO
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Predicted GO
BP GO:0051252 regulation of RNA metabolic process IEP Predicted GO
BP GO:0060255 regulation of macromolecule metabolic process IEP Predicted GO
BP GO:0080090 regulation of primary metabolic process IEP Predicted GO
MF GO:0140110 transcription regulator activity IEP Predicted GO
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Predicted GO
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Predicted GO
BP GO:2001141 regulation of RNA biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR001547 Glyco_hydro_5 61 250
No external refs found!