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  5. At4g33980

At4g33980


Description : BEST Arabidopsis thaliana protein match is: cold regulated gene 27 (TAIR:AT5G42900.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - /.../(source: NCBI BLink). [Source:TAIR;Acc:AT4G33980]


Gene families : OG_42_0003967 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0003967_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Arabidopsis release: At4g33980
Cluster HCCA clusters: Cluster_51

Target Alias Description ECC score Gene Family Method Actions
448001 No alias cold regulated gene 27 0.04 Orthogroups_2024-Update
Brara.A00416.1 No alias night-time repressor *(COR27) 0.07 Orthogroups_2024-Update
Brara.F03834.1 No alias night-time repressor *(COR27) 0.06 Orthogroups_2024-Update
Brara.K00969.1 No alias night-time repressor *(COR27) 0.03 Orthogroups_2024-Update
GRMZM5G815358 No alias cold regulated gene 27 0.04 Orthogroups_2024-Update
Glyma.02G131800 No alias cold regulated gene 27 0.04 Orthogroups_2024-Update
Glyma.07G213000 No alias cold regulated gene 27 0.04 Orthogroups_2024-Update
Glyma.14G083000 No alias cold regulated gene 27 0.07 Orthogroups_2024-Update
Glyma.17G242100 No alias cold regulated gene 27 0.04 Orthogroups_2024-Update
HORVU4Hr1G077480.3 No alias night-time repressor *(COR27) 0.03 Orthogroups_2024-Update
MA_48561g0010 No alias no hits & (original description: no original description) 0.03 Orthogroups_2024-Update
PSME_00024744-RA No alias (at1g05120 : 101.0) Helicase protein with RING/U-box... 0.03 Orthogroups_2024-Update
Potri.002G125900 No alias cold regulated gene 27 0.03 Orthogroups_2024-Update
Potri.009G101400 No alias cold regulated gene 27 0.04 Orthogroups_2024-Update
Potri.014G029000 No alias cold regulated gene 27 0.03 Orthogroups_2024-Update
Seita.9G515800.1 No alias night-time repressor *(COR27) 0.03 Orthogroups_2024-Update
Sobic.001G480400.1 No alias night-time repressor *(COR27) 0.05 Orthogroups_2024-Update
Solyc04g078880 No alias Cold regulated gene 27, putative isoform 1 (AHRD V3.3... 0.04 Orthogroups_2024-Update
Sopen04g032480 No alias hypothetical protein 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004133 glycogen debranching enzyme activity IEP Predicted GO
MF GO:0004134 4-alpha-glucanotransferase activity IEP Predicted GO
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Predicted GO
MF GO:0004602 glutathione peroxidase activity IEP Predicted GO
BP GO:0005975 carbohydrate metabolic process IEP Predicted GO
BP GO:0006771 riboflavin metabolic process IEP Predicted GO
MF GO:0008686 3,4-dihydroxy-2-butanone-4-phosphate synthase activity IEP Predicted GO
BP GO:0009231 riboflavin biosynthetic process IEP Predicted GO
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Predicted GO
MF GO:0030976 thiamine pyrophosphate binding IEP Predicted GO
BP GO:0042726 flavin-containing compound metabolic process IEP Predicted GO
BP GO:0042727 flavin-containing compound biosynthetic process IEP Predicted GO
BP GO:0046834 lipid phosphorylation IEP Predicted GO
BP GO:0046854 phosphatidylinositol phosphorylation IEP Predicted GO
MF GO:2001070 starch binding IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!