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  5. Seita.8G021700.1

Seita.8G021700.1


Description : auxin efflux transporter *(PIN) & auxin transporter *(PIN)


Gene families : OG_42_0000235 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000235_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.8G021700.1
Cluster HCAA Clusters: Cluster_40

Target Alias Description ECC score Gene Family Method Actions
A4A49_10554 No alias auxin efflux carrier component 6 0.02 Orthogroups_2024-Update
A4A49_14887 No alias auxin efflux carrier component 1 0.03 Orthogroups_2024-Update
At5g16530 No alias Auxin efflux carrier component... 0.02 Orthogroups_2024-Update
Glyma.09G061750 No alias Auxin efflux carrier family protein 0.02 Orthogroups_2024-Update
MA_61553g0010 No alias (at1g70940 : 290.0) A regulator of auxin efflux and... 0.03 Orthogroups_2024-Update
Potri.001G205200 No alias Auxin efflux carrier family protein 0.02 Orthogroups_2024-Update
Potri.002G072200 No alias Auxin efflux carrier family protein 0.03 Orthogroups_2024-Update
Pp1s402_39V6 No alias pind5-like auxin efflux carrier 0.03 Orthogroups_2024-Update
Seita.4G101300.1 No alias auxin efflux transporter *(PIN) & auxin transporter *(PIN) 0.02 Orthogroups_2024-Update
Seita.5G241500.1 No alias auxin efflux transporter *(PIN) & auxin transporter *(PIN) 0.06 Orthogroups_2024-Update
Seita.6G221100.1 No alias auxin efflux transporter *(PIN) & auxin transporter *(PIN) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA 16Dec
BP GO:0055085 transmembrane transport IEA 16Dec
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Type GO Term Name Evidence Source
BP GO:0006486 protein glycosylation IEP Predicted GO
BP GO:0043413 macromolecule glycosylation IEP Predicted GO
BP GO:0070085 glycosylation IEP Predicted GO
InterPro domains Description Start Stop
IPR004776 Mem_trans 9 555
No external refs found!