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  5. Seita.8G024800.1

Seita.8G024800.1


Description : indole-3-acetic acid-amido synthetase *(GH3)


Gene families : OG_42_0000128 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000128_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.8G024800.1
Cluster HCAA Clusters: Cluster_279

Target Alias Description ECC score Gene Family Method Actions
125443 No alias Auxin-responsive GH3 family protein 0.02 Orthogroups_2024-Update
99818 No alias Auxin-responsive GH3 family protein 0.01 Orthogroups_2024-Update
A4A49_23173 No alias jasmonic acid-amido synthetase jar1 0.03 Orthogroups_2024-Update
Glyma.12G216700 No alias Auxin-responsive GH3 family protein 0.03 Orthogroups_2024-Update
MA_10432413g0020 No alias (at5g54510 : 915.0) Encodes an IAA-amido synthase that... 0.02 Orthogroups_2024-Update
PSME_00043353-RA No alias (at5g54510 : 867.0) Encodes an IAA-amido synthase that... 0.02 Orthogroups_2024-Update
Seita.9G358800.1 No alias indole-3-acetic acid-amido synthetase *(GH3) 0.01 Orthogroups_2024-Update
Sobic.003G319900.1 No alias indole-3-acetic acid-amido synthetase *(GH3) 0.04 Orthogroups_2024-Update
Sopen12g001290 No alias GH3 auxin-responsive promoter 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000041 transition metal ion transport IEP Predicted GO
MF GO:0003905 alkylbase DNA N-glycosylase activity IEP Predicted GO
MF GO:0005375 copper ion transmembrane transporter activity IEP Predicted GO
CC GO:0005811 lipid droplet IEP Predicted GO
BP GO:0006825 copper ion transport IEP Predicted GO
MF GO:0008725 DNA-3-methyladenine glycosylase activity IEP Predicted GO
CC GO:0012511 monolayer-surrounded lipid storage body IEP Predicted GO
MF GO:0019104 DNA N-glycosylase activity IEP Predicted GO
BP GO:0035434 copper ion transmembrane transport IEP Predicted GO
MF GO:0043733 DNA-3-methylbase glycosylase activity IEP Predicted GO
MF GO:0046915 transition metal ion transmembrane transporter activity IEP Predicted GO
InterPro domains Description Start Stop
IPR004993 GH3 9 555
No external refs found!