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  5. Seita.8G031100.1

Seita.8G031100.1


Description : component *(DDP) of ISWI chromatin remodeling complex & PHD finger transcription factor


Gene families : OG_42_0001571 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001571_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.8G031100.1
Cluster HCAA Clusters: Cluster_114

Target Alias Description ECC score Gene Family Method Actions
Brara.C01015.1 No alias Unknown function 0.03 Orthogroups_2024-Update
GRMZM2G345553 No alias ABC2 homolog 7 0.05 Orthogroups_2024-Update
Glyma.11G095800 No alias DNA binding;zinc ion binding;DNA binding 0.03 Orthogroups_2024-Update
Glyma.12G084300 No alias PHD finger family protein 0.03 Orthogroups_2024-Update
MA_10689g0010 No alias (at5g35210 : 257.0) metalloendopeptidases;zinc ion... 0.03 Orthogroups_2024-Update
PSME_00009679-RA No alias (at5g12400 : 514.0) DNA binding;zinc ion binding;DNA... 0.05 Orthogroups_2024-Update
Potri.009G049100 No alias DNA binding;zinc ion binding;DNA binding 0.02 Orthogroups_2024-Update
Sobic.002G405800.1 No alias component *(DDP) of ISWI chromatin remodeling complex &... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEP Predicted GO
CC GO:0005643 nuclear pore IEP Predicted GO
CC GO:0005667 transcription factor complex IEP Predicted GO
CC GO:0005669 transcription factor TFIID complex IEP Predicted GO
BP GO:0006476 protein deacetylation IEP Predicted GO
BP GO:0006913 nucleocytoplasmic transport IEP Predicted GO
BP GO:0016569 covalent chromatin modification IEP Predicted GO
BP GO:0016570 histone modification IEP Predicted GO
BP GO:0016575 histone deacetylation IEP Predicted GO
MF GO:0017056 structural constituent of nuclear pore IEP Predicted GO
BP GO:0032774 RNA biosynthetic process IEP Predicted GO
BP GO:0035601 protein deacylation IEP Predicted GO
CC GO:0044428 nuclear part IEP Predicted GO
CC GO:0044798 nuclear transcription factor complex IEP Predicted GO
BP GO:0051169 nuclear transport IEP Predicted GO
CC GO:0090575 RNA polymerase II transcription factor complex IEP Predicted GO
BP GO:0098732 macromolecule deacylation IEP Predicted GO
InterPro domains Description Start Stop
IPR018501 DDT_dom 386 442
IPR019787 Znf_PHD-finger 602 644
No external refs found!