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  5. Solyc03g112540

Solyc03g112540


Description : NAD(P)-binding Rossmann-fold superfamily protein (AHRD V3.3 *** AT5G50130.1)


Gene families : OG_42_0000257 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000257_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc03g112540
Cluster HCCA clusters: Cluster_142

Target Alias Description ECC score Gene Family Method Actions
PSME_00009154-RA No alias (at5g02540 : 431.0) NAD(P)-binding Rossmann-fold... 0.03 Orthogroups_2024-Update
Potri.012G143800 No alias NAD(P)-binding Rossmann-fold superfamily protein 0.04 Orthogroups_2024-Update
Sopen03g004250 No alias short chain dehydrogenase 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP Predicted GO
MF GO:0005199 structural constituent of cell wall IEP Predicted GO
BP GO:0006359 regulation of transcription by RNA polymerase III IEP Predicted GO
BP GO:0006904 vesicle docking involved in exocytosis IEP Predicted GO
BP GO:0009664 plant-type cell wall organization IEP Predicted GO
BP GO:0009890 negative regulation of biosynthetic process IEP Predicted GO
BP GO:0009892 negative regulation of metabolic process IEP Predicted GO
BP GO:0010558 negative regulation of macromolecule biosynthetic process IEP Predicted GO
BP GO:0010605 negative regulation of macromolecule metabolic process IEP Predicted GO
BP GO:0010629 negative regulation of gene expression IEP Predicted GO
BP GO:0016480 negative regulation of transcription by RNA polymerase III IEP Predicted GO
MF GO:0016837 carbon-oxygen lyase activity, acting on polysaccharides IEP Predicted GO
BP GO:0022406 membrane docking IEP Predicted GO
MF GO:0030570 pectate lyase activity IEP Predicted GO
BP GO:0031324 negative regulation of cellular metabolic process IEP Predicted GO
BP GO:0031327 negative regulation of cellular biosynthetic process IEP Predicted GO
CC GO:0044448 cell cortex part IEP Predicted GO
BP GO:0045892 negative regulation of transcription, DNA-templated IEP Predicted GO
BP GO:0045934 negative regulation of nucleobase-containing compound metabolic process IEP Predicted GO
BP GO:0048278 vesicle docking IEP Predicted GO
BP GO:0048523 negative regulation of cellular process IEP Predicted GO
BP GO:0051172 negative regulation of nitrogen compound metabolic process IEP Predicted GO
BP GO:0051253 negative regulation of RNA metabolic process IEP Predicted GO
BP GO:0051640 organelle localization IEP Predicted GO
BP GO:0071669 plant-type cell wall organization or biogenesis IEP Predicted GO
CC GO:0099023 tethering complex IEP Predicted GO
BP GO:0140029 exocytic process IEP Predicted GO
BP GO:0140056 organelle localization by membrane tethering IEP Predicted GO
BP GO:1902679 negative regulation of RNA biosynthetic process IEP Predicted GO
BP GO:1903507 negative regulation of nucleic acid-templated transcription IEP Predicted GO
BP GO:2000113 negative regulation of cellular macromolecule biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR002347 SDR_fam 39 180
No external refs found!