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  5. Seita.8G048200.1

Seita.8G048200.1


Description : Unknown function


Gene families : OG_42_0000172 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000172_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.8G048200.1
Cluster HCAA Clusters: Cluster_294

Target Alias Description ECC score Gene Family Method Actions
A4A49_32703 No alias lrr receptor-like serinethreonine-protein kinase gso2 0.04 Orthogroups_2024-Update
A4A49_38013 No alias lrr receptor-like serinethreonine-protein kinase gso2 0.03 Orthogroups_2024-Update
At2g34930 No alias Disease resistance family protein / LRR family protein... 0.02 Orthogroups_2024-Update
Bradi2g42820 No alias disease resistance family protein / LRR family protein 0.03 Orthogroups_2024-Update
Bradi3g41810 No alias disease resistance family protein / LRR family protein 0.02 Orthogroups_2024-Update
Bradi4g16234 No alias receptor like protein 11 0.03 Orthogroups_2024-Update
GRMZM2G079303 No alias receptor like protein 48 0.03 Orthogroups_2024-Update
GRMZM2G083797 No alias disease resistance family protein / LRR family protein 0.04 Orthogroups_2024-Update
Glyma.07G219802 No alias disease resistance family protein / LRR family protein 0.04 Orthogroups_2024-Update
Glyma.09G272101 No alias disease resistance family protein / LRR family protein 0.03 Orthogroups_2024-Update
Glyma.10G129000 No alias disease resistance family protein / LRR family protein 0.01 Orthogroups_2024-Update
Glyma.13G050500 No alias disease resistance family protein / LRR family protein 0.04 Orthogroups_2024-Update
Glyma.15G254300 No alias disease resistance family protein / LRR family protein 0.03 Orthogroups_2024-Update
HORVU2Hr1G013710.1 No alias Unknown function 0.04 Orthogroups_2024-Update
HORVU4Hr1G001040.13 No alias Unknown function 0.03 Orthogroups_2024-Update
HORVU4Hr1G001380.1 No alias Unknown function 0.03 Orthogroups_2024-Update
HORVU5Hr1G087410.3 No alias Unknown function 0.04 Orthogroups_2024-Update
HORVU5Hr1G087420.2 No alias Unknown function 0.02 Orthogroups_2024-Update
HORVU7Hr1G006610.3 No alias Unknown function 0.04 Orthogroups_2024-Update
LOC_Os11g35450 No alias leucine-rich repeat receptor protein kinase EXS... 0.03 Orthogroups_2024-Update
Seita.1G122700.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Seita.5G215800.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Seita.5G217000.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Seita.8G237800.1 No alias Unknown function 0.01 Orthogroups_2024-Update
Sobic.003G100500.2 No alias Unknown function 0.02 Orthogroups_2024-Update
Sobic.003G210601.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Sobic.007G080780.1 No alias Unknown function 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA 16Dec
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Type GO Term Name Evidence Source
CC GO:0000347 THO complex IEP Predicted GO
CC GO:0000445 THO complex part of transcription export complex IEP Predicted GO
MF GO:0005507 copper ion binding IEP Predicted GO
MF GO:0008234 cysteine-type peptidase activity IEP Predicted GO
BP GO:0009116 nucleoside metabolic process IEP Predicted GO
BP GO:0019321 pentose metabolic process IEP Predicted GO
BP GO:0019566 arabinose metabolic process IEP Predicted GO
BP GO:0046373 L-arabinose metabolic process IEP Predicted GO
MF GO:0046556 alpha-L-arabinofuranosidase activity IEP Predicted GO
BP GO:1901657 glycosyl compound metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR013210 LRR_N_plant-typ 65 108
IPR001611 Leu-rich_rpt 140 163
No external refs found!