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  5. Seita.8G075200.1

Seita.8G075200.1


Description : Unknown function


Gene families : OG_42_0003845 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0003845_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.8G075200.1
Cluster HCAA Clusters: Cluster_138

Target Alias Description ECC score Gene Family Method Actions
A4A49_20157 No alias hypothetical protein 0.03 Orthogroups_2024-Update
LOC_Os11g14990 No alias expressed protein 0.03 Orthogroups_2024-Update
Potri.013G127400 No alias Eukaryotic protein of unknown function (DUF842) 0.03 Orthogroups_2024-Update
Solyc06g053490 No alias FAM136A-like protein (DUF842) (AHRD V3.3 *** AT2G31725.1) 0.03 Orthogroups_2024-Update
Sopen06g018570 No alias Eukaryotic protein of unknown function (DUF842) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP Predicted GO
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP Predicted GO
MF GO:0003779 actin binding IEP Predicted GO
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP Predicted GO
MF GO:0005488 binding IEP Predicted GO
CC GO:0005741 mitochondrial outer membrane IEP Predicted GO
MF GO:0016859 cis-trans isomerase activity IEP Predicted GO
CC GO:0019867 outer membrane IEP Predicted GO
CC GO:0031090 organelle membrane IEP Predicted GO
CC GO:0031966 mitochondrial membrane IEP Predicted GO
CC GO:0031968 organelle outer membrane IEP Predicted GO
MF GO:0034062 5'-3' RNA polymerase activity IEP Predicted GO
CC GO:0044429 mitochondrial part IEP Predicted GO
MF GO:0097747 RNA polymerase activity IEP Predicted GO
CC GO:0098588 bounding membrane of organelle IEP Predicted GO
CC GO:0098805 whole membrane IEP Predicted GO
InterPro domains Description Start Stop
IPR008560 DUF842_euk 20 143
No external refs found!