Seita.8G081300.1

Description : bifunctional alpha-L-arabinofuranosidase and beta-D-xylosidase *(ASD)

Gene families : OG_42_0002179 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002179_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Setaria italica: Seita.8G081300.1

Target	Alias	Description	ECC score	Gene Family Method
A4A49_06379	No alias	alpha-l-arabinofuranosidase 1	0.04	Orthogroups_2024-Update
Bradi1g57017	No alias	alpha-L-arabinofuranosidase 1	0.04	Orthogroups_2024-Update
Brara.A03456.1	No alias	bifunctional alpha-L-arabinofuranosidase and...	0.03	Orthogroups_2024-Update
LOC_Os03g20420	No alias	alpha-N-arabinofuranosidase A, putative, expressed	0.02	Orthogroups_2024-Update
LOC_Os11g03730	No alias	alpha-N-arabinofuranosidase A, putative, expressed	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	None	Extended
BP	GO:0005975	carbohydrate metabolic process	None	Extended
BP	GO:0005996	monosaccharide metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016798	hydrolase activity, acting on glycosyl bonds	None	Extended
BP	GO:0019321	pentose metabolic process	None	Extended
BP	GO:0019566	arabinose metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044281	small molecule metabolic process	None	Extended
BP	GO:0046373	L-arabinose metabolic process	IEA	16Dec
MF	GO:0046556	alpha-L-arabinofuranosidase activity	IEA	16Dec
BP	GO:0071704	organic substance metabolic process	None	Extended

Type	GO Term	Name	Evidence	Source
CC	GO:0000347	THO complex	IEP	Predicted GO
CC	GO:0000445	THO complex part of transcription export complex	IEP	Predicted GO
MF	GO:0005507	copper ion binding	IEP	Predicted GO
BP	GO:0009116	nucleoside metabolic process	IEP	Predicted GO
MF	GO:0009678	hydrogen-translocating pyrophosphatase activity	IEP	Predicted GO
BP	GO:0015672	monovalent inorganic cation transport	IEP	Predicted GO
MF	GO:0016491	oxidoreductase activity	IEP	Predicted GO
BP	GO:0098660	inorganic ion transmembrane transport	IEP	Predicted GO
BP	GO:0098662	inorganic cation transmembrane transport	IEP	Predicted GO
BP	GO:1901657	glycosyl compound metabolic process	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR010720	Alpha-L-AF_C	456	644

External Links

No external refs found!