Description : RNA editing factor *(MORF)
Gene families : OG_42_0000510 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000510_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Setaria italica: Seita.8G095000.1 | |
Cluster | HCAA Clusters: Cluster_75 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
At3g15000 | No alias | Multiple organellar RNA editing factor 8,... | 0.03 | Orthogroups_2024-Update | |
Bradi3g14650 | No alias | plastid developmental protein DAG, putative | 0.03 | Orthogroups_2024-Update | |
Bradi4g22160 | No alias | Function unknown | 0.09 | Orthogroups_2024-Update | |
Bradi5g20660 | No alias | differentiation and greening-like 1 | 0.04 | Orthogroups_2024-Update | |
Brara.A01086.1 | No alias | RNA editing factor *(MORF) | 0.08 | Orthogroups_2024-Update | |
Brara.C03552.1 | No alias | RNA editing factor *(MORF) | 0.11 | Orthogroups_2024-Update | |
Brara.D02033.1 | No alias | RNA editing factor *(MORF) | 0.04 | Orthogroups_2024-Update | |
Brara.D02132.1 | No alias | RNA editing factor *(MORF) | 0.03 | Orthogroups_2024-Update | |
Brara.E00914.1 | No alias | RNA editing factor *(MORF) | 0.08 | Orthogroups_2024-Update | |
Brara.E01050.1 | No alias | RNA editing factor *(MORF) | 0.03 | Orthogroups_2024-Update | |
Brara.F00767.1 | No alias | RNA editing factor *(MORF) | 0.04 | Orthogroups_2024-Update | |
Brara.G00411.1 | No alias | RNA editing factor *(MORF) | 0.06 | Orthogroups_2024-Update | |
Brara.H02711.1 | No alias | RNA editing factor *(MORF) | 0.03 | Orthogroups_2024-Update | |
Brara.K01028.1 | No alias | RNA editing factor *(MORF) | 0.05 | Orthogroups_2024-Update | |
Brara.K01789.1 | No alias | RNA editing factor *(MORF) | 0.09 | Orthogroups_2024-Update | |
GRMZM2G003765 | No alias | plastid developmental protein DAG, putative | 0.03 | Orthogroups_2024-Update | |
GRMZM2G383540 | No alias | plastid developmental protein DAG, putative | 0.03 | Orthogroups_2024-Update | |
Glyma.08G188700 | No alias | Function unknown | 0.05 | Orthogroups_2024-Update | |
Glyma.10G005100 | No alias | differentiation and greening-like 1 | 0.03 | Orthogroups_2024-Update | |
Glyma.12G169200 | No alias | Function unknown | 0.08 | Orthogroups_2024-Update | |
Glyma.12G228400 | No alias | cobalt ion binding | 0.06 | Orthogroups_2024-Update | |
Glyma.13G271400 | No alias | cobalt ion binding | 0.1 | Orthogroups_2024-Update | |
HORVU4Hr1G016440.1 | No alias | RNA editing factor *(MORF) | 0.05 | Orthogroups_2024-Update | |
HORVU7Hr1G008880.2 | No alias | RNA editing factor *(MORF) | 0.03 | Orthogroups_2024-Update | |
HORVU7Hr1G073170.2 | No alias | RNA editing factor *(MORF) | 0.05 | Orthogroups_2024-Update | |
Potri.003G015100 | No alias | Function unknown | 0.03 | Orthogroups_2024-Update | |
Potri.011G112200 | No alias | cobalt ion binding | 0.04 | Orthogroups_2024-Update | |
Sobic.001G485600.1 | No alias | RNA editing factor *(MORF) | 0.07 | Orthogroups_2024-Update | |
Sobic.005G100900.1 | No alias | RNA editing factor *(MORF) | 0.12 | Orthogroups_2024-Update | |
Sobic.006G204100.1 | No alias | RNA editing factor *(MORF) | 0.06 | Orthogroups_2024-Update | |
Sobic.007G034500.1 | No alias | RNA editing factor *(MORF) | 0.03 | Orthogroups_2024-Update | |
Sobic.010G013900.1 | No alias | RNA editing factor *(MORF) | 0.09 | Orthogroups_2024-Update | |
Solyc01g066060 | No alias | DAG protein (AHRD V3.3 *** K7TSG0_MAIZE) | 0.04 | Orthogroups_2024-Update | |
Solyc02g079210 | No alias | DAG protein (AHRD V3.3 *** B6SJX7_MAIZE) | 0.12 | Orthogroups_2024-Update | |
Solyc05g054960 | No alias | Peroxisome biogenesis protein 12 (AHRD V3.3 *** K4C2H2_SOLLC) | 0.09 | Orthogroups_2024-Update | |
Solyc06g008220 | No alias | DAG protein (AHRD V3.3 *** A0A0K9Q0F0_ZOSMR) | 0.05 | Orthogroups_2024-Update | |
Solyc12g014230 | No alias | DAG protein (AHRD V3.3 *** A0A0K9PW98_ZOSMR) | 0.05 | Orthogroups_2024-Update | |
Sopen02g024010 | No alias | hypothetical protein | 0.06 | Orthogroups_2024-Update | |
Sopen05g033420 | No alias | hypothetical protein | 0.05 | Orthogroups_2024-Update | |
Sopen06g003080 | No alias | hypothetical protein | 0.03 | Orthogroups_2024-Update | |
Sopen10g003300 | No alias | hypothetical protein | 0.07 | Orthogroups_2024-Update | |
Sopen12g006020 | No alias | hypothetical protein | 0.02 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0000166 | nucleotide binding | IEP | Predicted GO |
BP | GO:0001522 | pseudouridine synthesis | IEP | Predicted GO |
MF | GO:0003676 | nucleic acid binding | IEP | Predicted GO |
MF | GO:0003697 | single-stranded DNA binding | IEP | Predicted GO |
MF | GO:0003723 | RNA binding | IEP | Predicted GO |
MF | GO:0003735 | structural constituent of ribosome | IEP | Predicted GO |
MF | GO:0003896 | DNA primase activity | IEP | Predicted GO |
MF | GO:0003899 | DNA-directed 5'-3' RNA polymerase activity | IEP | Predicted GO |
MF | GO:0003909 | DNA ligase activity | IEP | Predicted GO |
MF | GO:0003910 | DNA ligase (ATP) activity | IEP | Predicted GO |
MF | GO:0004176 | ATP-dependent peptidase activity | IEP | Predicted GO |
MF | GO:0004812 | aminoacyl-tRNA ligase activity | IEP | Predicted GO |
MF | GO:0004819 | glutamine-tRNA ligase activity | IEP | Predicted GO |
MF | GO:0005198 | structural molecule activity | IEP | Predicted GO |
MF | GO:0005488 | binding | IEP | Predicted GO |
MF | GO:0005524 | ATP binding | IEP | Predicted GO |
CC | GO:0005634 | nucleus | IEP | Predicted GO |
CC | GO:0005732 | small nucleolar ribonucleoprotein complex | IEP | Predicted GO |
CC | GO:0005741 | mitochondrial outer membrane | IEP | Predicted GO |
CC | GO:0005840 | ribosome | IEP | Predicted GO |
BP | GO:0006082 | organic acid metabolic process | IEP | Predicted GO |
BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | Predicted GO |
BP | GO:0006259 | DNA metabolic process | IEP | Predicted GO |
BP | GO:0006269 | DNA replication, synthesis of RNA primer | IEP | Predicted GO |
BP | GO:0006310 | DNA recombination | IEP | Predicted GO |
BP | GO:0006351 | transcription, DNA-templated | IEP | Predicted GO |
BP | GO:0006364 | rRNA processing | IEP | Predicted GO |
BP | GO:0006396 | RNA processing | IEP | Predicted GO |
BP | GO:0006399 | tRNA metabolic process | IEP | Predicted GO |
BP | GO:0006412 | translation | IEP | Predicted GO |
BP | GO:0006418 | tRNA aminoacylation for protein translation | IEP | Predicted GO |
BP | GO:0006425 | glutaminyl-tRNA aminoacylation | IEP | Predicted GO |
BP | GO:0006518 | peptide metabolic process | IEP | Predicted GO |
BP | GO:0006520 | cellular amino acid metabolic process | IEP | Predicted GO |
BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | Predicted GO |
BP | GO:0006807 | nitrogen compound metabolic process | IEP | Predicted GO |
BP | GO:0008033 | tRNA processing | IEP | Predicted GO |
MF | GO:0008144 | drug binding | IEP | Predicted GO |
BP | GO:0008152 | metabolic process | IEP | Predicted GO |
BP | GO:0009058 | biosynthetic process | IEP | Predicted GO |
BP | GO:0009059 | macromolecule biosynthetic process | IEP | Predicted GO |
BP | GO:0009451 | RNA modification | IEP | Predicted GO |
MF | GO:0009982 | pseudouridine synthase activity | IEP | Predicted GO |
BP | GO:0009987 | cellular process | IEP | Predicted GO |
BP | GO:0016070 | RNA metabolic process | IEP | Predicted GO |
BP | GO:0016072 | rRNA metabolic process | IEP | Predicted GO |
BP | GO:0016458 | gene silencing | IEP | Predicted GO |
MF | GO:0016763 | transferase activity, transferring pentosyl groups | IEP | Predicted GO |
MF | GO:0016779 | nucleotidyltransferase activity | IEP | Predicted GO |
MF | GO:0016866 | intramolecular transferase activity | IEP | Predicted GO |
MF | GO:0016874 | ligase activity | IEP | Predicted GO |
MF | GO:0016875 | ligase activity, forming carbon-oxygen bonds | IEP | Predicted GO |
MF | GO:0016886 | ligase activity, forming phosphoric ester bonds | IEP | Predicted GO |
MF | GO:0017076 | purine nucleotide binding | IEP | Predicted GO |
BP | GO:0018130 | heterocycle biosynthetic process | IEP | Predicted GO |
BP | GO:0019438 | aromatic compound biosynthetic process | IEP | Predicted GO |
BP | GO:0019752 | carboxylic acid metabolic process | IEP | Predicted GO |
CC | GO:0019867 | outer membrane | IEP | Predicted GO |
MF | GO:0030554 | adenyl nucleotide binding | IEP | Predicted GO |
CC | GO:0030684 | preribosome | IEP | Predicted GO |
BP | GO:0031047 | gene silencing by RNA | IEP | Predicted GO |
CC | GO:0031090 | organelle membrane | IEP | Predicted GO |
MF | GO:0031267 | small GTPase binding | IEP | Predicted GO |
CC | GO:0031966 | mitochondrial membrane | IEP | Predicted GO |
CC | GO:0031968 | organelle outer membrane | IEP | Predicted GO |
CC | GO:0032040 | small-subunit processome | IEP | Predicted GO |
MF | GO:0032553 | ribonucleotide binding | IEP | Predicted GO |
MF | GO:0032555 | purine ribonucleotide binding | IEP | Predicted GO |
MF | GO:0032559 | adenyl ribonucleotide binding | IEP | Predicted GO |
BP | GO:0032774 | RNA biosynthetic process | IEP | Predicted GO |
CC | GO:0032991 | protein-containing complex | IEP | Predicted GO |
MF | GO:0034062 | 5'-3' RNA polymerase activity | IEP | Predicted GO |
CC | GO:0034457 | Mpp10 complex | IEP | Predicted GO |
BP | GO:0034470 | ncRNA processing | IEP | Predicted GO |
BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | Predicted GO |
BP | GO:0034645 | cellular macromolecule biosynthetic process | IEP | Predicted GO |
BP | GO:0034654 | nucleobase-containing compound biosynthetic process | IEP | Predicted GO |
BP | GO:0034660 | ncRNA metabolic process | IEP | Predicted GO |
MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | Predicted GO |
MF | GO:0036094 | small molecule binding | IEP | Predicted GO |
BP | GO:0043038 | amino acid activation | IEP | Predicted GO |
BP | GO:0043039 | tRNA aminoacylation | IEP | Predicted GO |
BP | GO:0043043 | peptide biosynthetic process | IEP | Predicted GO |
MF | GO:0043168 | anion binding | IEP | Predicted GO |
BP | GO:0043170 | macromolecule metabolic process | IEP | Predicted GO |
CC | GO:0043226 | organelle | IEP | Predicted GO |
CC | GO:0043228 | non-membrane-bounded organelle | IEP | Predicted GO |
CC | GO:0043229 | intracellular organelle | IEP | Predicted GO |
CC | GO:0043232 | intracellular non-membrane-bounded organelle | IEP | Predicted GO |
BP | GO:0043436 | oxoacid metabolic process | IEP | Predicted GO |
BP | GO:0043603 | cellular amide metabolic process | IEP | Predicted GO |
BP | GO:0043604 | amide biosynthetic process | IEP | Predicted GO |
BP | GO:0044237 | cellular metabolic process | IEP | Predicted GO |
BP | GO:0044238 | primary metabolic process | IEP | Predicted GO |
BP | GO:0044249 | cellular biosynthetic process | IEP | Predicted GO |
BP | GO:0044271 | cellular nitrogen compound biosynthetic process | IEP | Predicted GO |
BP | GO:0044281 | small molecule metabolic process | IEP | Predicted GO |
CC | GO:0044424 | intracellular part | IEP | Predicted GO |
CC | GO:0044429 | mitochondrial part | IEP | Predicted GO |
CC | GO:0044444 | cytoplasmic part | IEP | Predicted GO |
CC | GO:0044452 | nucleolar part | IEP | Predicted GO |
CC | GO:0044464 | cell part | IEP | Predicted GO |
BP | GO:0046483 | heterocycle metabolic process | IEP | Predicted GO |
BP | GO:0071704 | organic substance metabolic process | IEP | Predicted GO |
BP | GO:0090304 | nucleic acid metabolic process | IEP | Predicted GO |
MF | GO:0097159 | organic cyclic compound binding | IEP | Predicted GO |
MF | GO:0097367 | carbohydrate derivative binding | IEP | Predicted GO |
BP | GO:0097659 | nucleic acid-templated transcription | IEP | Predicted GO |
MF | GO:0097747 | RNA polymerase activity | IEP | Predicted GO |
CC | GO:0098588 | bounding membrane of organelle | IEP | Predicted GO |
CC | GO:0098805 | whole membrane | IEP | Predicted GO |
MF | GO:0140098 | catalytic activity, acting on RNA | IEP | Predicted GO |
MF | GO:0140101 | catalytic activity, acting on a tRNA | IEP | Predicted GO |
MF | GO:1901265 | nucleoside phosphate binding | IEP | Predicted GO |
BP | GO:1901360 | organic cyclic compound metabolic process | IEP | Predicted GO |
BP | GO:1901362 | organic cyclic compound biosynthetic process | IEP | Predicted GO |
MF | GO:1901363 | heterocyclic compound binding | IEP | Predicted GO |
BP | GO:1901566 | organonitrogen compound biosynthetic process | IEP | Predicted GO |
BP | GO:1901576 | organic substance biosynthetic process | IEP | Predicted GO |
CC | GO:1990904 | ribonucleoprotein complex | IEP | Predicted GO |
No InterPro domains available for this sequence
No external refs found! |