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  5. Seita.8G097200.1

Seita.8G097200.1


Description : Unknown function


Gene families : OG_42_0000001 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.8G097200.1
Cluster HCAA Clusters: Cluster_388

Target Alias Description ECC score Gene Family Method Actions
AC203841.3_FG002 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.01 Orthogroups_2024-Update
Bradi4g28137 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 Orthogroups_2024-Update
Brara.A00680.1 No alias RNA editing factor *(MEF29) 0.02 Orthogroups_2024-Update
Brara.E03491.1 No alias Unknown function 0.05 Orthogroups_2024-Update
Brara.H02105.1 No alias RNA editing factor *(OTP90) 0.03 Orthogroups_2024-Update
GRMZM2G161368 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.02 Orthogroups_2024-Update
GRMZM2G423538 No alias Pentatricopeptide repeat (PPR-like) superfamily protein 0.01 Orthogroups_2024-Update
Glyma.11G069901 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 Orthogroups_2024-Update
HORVU3Hr1G019130.5 No alias Unknown function 0.02 Orthogroups_2024-Update
HORVU7Hr1G094640.60 No alias Unknown function 0.03 Orthogroups_2024-Update
LOC_Os04g21910 No alias pentatricopeptide, putative, expressed 0.01 Orthogroups_2024-Update
LOC_Os07g15570 No alias pentatricopeptide, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os07g39090 No alias pentatricopeptide repeat domain containing protein,... 0.01 Orthogroups_2024-Update
MA_68933g0010 No alias (at5g04780 : 542.0) Pentatricopeptide repeat (PPR)... 0.02 Orthogroups_2024-Update
PSME_00000625-RA No alias (at3g09040 : 618.0) Pentatricopeptide repeat (PPR)... 0.03 Orthogroups_2024-Update
PSME_00003207-RA No alias (at3g03580 : 671.0) Tetratricopeptide repeat (TPR)-like... 0.07 Orthogroups_2024-Update
PSME_00004102-RA No alias (at4g02750 : 508.0) Tetratricopeptide repeat (TPR)-like... 0.03 Orthogroups_2024-Update
PSME_00005432-RA No alias (at1g11290 : 677.0) Pentatricopeptide Repeat Protein... 0.02 Orthogroups_2024-Update
PSME_00008064-RA No alias (at3g49170 : 637.0) embryo defective 2261 (EMB2261);... 0.02 Orthogroups_2024-Update
PSME_00015835-RA No alias (at4g01030 : 610.0) pentatricopeptide (PPR)... 0.03 Orthogroups_2024-Update
PSME_00025196-RA No alias (at3g03580 : 681.0) Tetratricopeptide repeat (TPR)-like... 0.03 Orthogroups_2024-Update
PSME_00026226-RA No alias (at3g46790 : 588.0) Encodes a member of a PCMP (plant... 0.02 Orthogroups_2024-Update
PSME_00030552-RA No alias (at4g18750 : 502.0) Encodes a pentatricopeptide (PPR)... 0.04 Orthogroups_2024-Update
PSME_00032006-RA No alias (at2g13600 : 367.0) Pentatricopeptide repeat (PPR)... 0.03 Orthogroups_2024-Update
PSME_00035796-RA No alias (at1g11290 : 732.0) Pentatricopeptide Repeat Protein... 0.02 Orthogroups_2024-Update
PSME_00041541-RA No alias (at3g12770 : 598.0) Encodes a pentatricopeptide repeat... 0.02 Orthogroups_2024-Update
PSME_00056296-RA No alias (at4g13650 : 664.0) Pentatricopeptide repeat (PPR)... 0.02 Orthogroups_2024-Update
PSME_00056374-RA No alias (at4g37170 : 594.0) Pentatricopeptide repeat (PPR)... 0.06 Orthogroups_2024-Update
Potri.001G075800 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 Orthogroups_2024-Update
Potri.003G191000 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.02 Orthogroups_2024-Update
Potri.013G058900 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.01 Orthogroups_2024-Update
Potri.018G071800 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.01 Orthogroups_2024-Update
Pp1s26_175V6 No alias T28P6.20; pentatricopeptide (PPR) repeat-containing... 0.04 Orthogroups_2024-Update
Solyc02g094480 No alias Pentatricopeptide repeat-containing protein (AHRD V3.3... 0.02 Orthogroups_2024-Update
Sopen02g019790 No alias PPR repeat family 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006629 lipid metabolic process IEP Predicted GO
BP GO:0006720 isoprenoid metabolic process IEP Predicted GO
BP GO:0008299 isoprenoid biosynthetic process IEP Predicted GO
BP GO:0008610 lipid biosynthetic process IEP Predicted GO
BP GO:0044255 cellular lipid metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 268 294
IPR002885 Pentatricopeptide_repeat 161 181
No external refs found!