1. Home
  2. Species
  3. Setaria italica
  4. Sequence
  5. Seita.8G101600.1

Seita.8G101600.1


Description : Unknown function


Gene families : OG_42_0000064 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000064_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.8G101600.1
Cluster HCAA Clusters: Cluster_220

Target Alias Description ECC score Gene Family Method Actions
Bradi1g55672 No alias HOPZ-ACTIVATED RESISTANCE 1 0.03 Orthogroups_2024-Update
Bradi2g39074 No alias Disease resistance protein (CC-NBS-LRR class) family 0.02 Orthogroups_2024-Update
Bradi2g39247 No alias NB-ARC domain-containing disease resistance protein 0.05 Orthogroups_2024-Update
Bradi3g15593 No alias NB-ARC domain-containing disease resistance protein 0.09 Orthogroups_2024-Update
Bradi3g39933 No alias Disease resistance protein (CC-NBS-LRR class) family 0.04 Orthogroups_2024-Update
Bradi4g12877 No alias NB-ARC domain-containing disease resistance protein 0.06 Orthogroups_2024-Update
GRMZM2G098677 No alias NB-ARC domain-containing disease resistance protein 0.05 Orthogroups_2024-Update
HORVU1Hr1G084200.53 No alias Unknown function 0.03 Orthogroups_2024-Update
HORVU1Hr1G089990.2 No alias Unknown function 0.04 Orthogroups_2024-Update
HORVU2Hr1G004150.3 No alias Unknown function 0.02 Orthogroups_2024-Update
HORVU2Hr1G011300.4 No alias Unknown function 0.04 Orthogroups_2024-Update
HORVU5Hr1G125350.1 No alias Unknown function 0.02 Orthogroups_2024-Update
LOC_Os07g12670 No alias expressed protein 0.04 Orthogroups_2024-Update
LOC_Os07g40810 No alias NBS-LRR type disease resistance protein, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os09g12580 No alias expressed protein 0.02 Orthogroups_2024-Update
LOC_Os11g28460 No alias expressed protein 0.04 Orthogroups_2024-Update
LOC_Os11g34920 No alias stripe rust resistance protein Yr10, putative, expressed 0.02 Orthogroups_2024-Update
Seita.3G305400.1 No alias Unknown function 0.07 Orthogroups_2024-Update
Seita.3G388700.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Seita.8G124300.1 No alias Unknown function 0.05 Orthogroups_2024-Update
Seita.8G191900.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Seita.8G199800.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Seita.8G202300.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Seita.8G228400.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.002G031100.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.005G030000.1 No alias Unknown function 0.05 Orthogroups_2024-Update
Sobic.007G124800.1 No alias Unknown function 0.05 Orthogroups_2024-Update
Sobic.007G148100.1 No alias Unknown function 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0043531 ADP binding IEA 16Dec
Toggle parental
Type GO Term Name Evidence Source
MF GO:0001871 pattern binding IEP Predicted GO
CC GO:0005576 extracellular region IEP Predicted GO
CC GO:0005618 cell wall IEP Predicted GO
BP GO:0005976 polysaccharide metabolic process IEP Predicted GO
BP GO:0006073 cellular glucan metabolic process IEP Predicted GO
MF GO:0016409 palmitoyltransferase activity IEP Predicted GO
MF GO:0016740 transferase activity IEP Predicted GO
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP Predicted GO
MF GO:0030247 polysaccharide binding IEP Predicted GO
CC GO:0030312 external encapsulating structure IEP Predicted GO
BP GO:0044042 glucan metabolic process IEP Predicted GO
BP GO:0044262 cellular carbohydrate metabolic process IEP Predicted GO
BP GO:0044264 cellular polysaccharide metabolic process IEP Predicted GO
MF GO:0046527 glucosyltransferase activity IEP Predicted GO
CC GO:0048046 apoplast IEP Predicted GO
InterPro domains Description Start Stop
IPR002182 NB-ARC 175 416
No external refs found!