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  5. Seita.8G120000.1

Seita.8G120000.1


Description : component *(Sec24) of Sec23/24 cargo adaptor subcomplex


Gene families : OG_42_0001342 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001342_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.8G120000.1
Cluster HCAA Clusters: Cluster_122

Target Alias Description ECC score Gene Family Method Actions
Bradi4g07970 No alias Sec23/Sec24 protein transport family protein 0.04 Orthogroups_2024-Update
Glyma.10G280700 No alias Sec23/Sec24 protein transport family protein 0.04 Orthogroups_2024-Update
Glyma.20G109000 No alias Sec23/Sec24 protein transport family protein 0.03 Orthogroups_2024-Update
Kfl00083_0010 kfl00083_0010_v1.1 (at3g07100 : 780.0) Encodes SEC24a/ERMO2. Required for... 0.04 Orthogroups_2024-Update
Kfl00083_0020 kfl00083_0020_v1.... (at3g44340 : 803.0) homologous to yeast and animal Sec24... 0.02 Orthogroups_2024-Update
LOC_Os11g29200 No alias protein transport protein, putative, expressed 0.02 Orthogroups_2024-Update
Mp7g13560.1 No alias component Sec24 of Sec23/24 cargo adaptor subcomplex 0.02 Orthogroups_2024-Update
Solyc02g082220 No alias Transport protein Sec24 (AHRD V3.3 *** B9HM39_POPTR) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0006886 intracellular protein transport IEA 16Dec
BP GO:0006888 ER to Golgi vesicle-mediated transport IEA 16Dec
MF GO:0008270 zinc ion binding IEA 16Dec
CC GO:0030127 COPII vesicle coat IEA 16Dec
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Type GO Term Name Evidence Source
CC GO:0000148 1,3-beta-D-glucan synthase complex IEP Predicted GO
CC GO:0000151 ubiquitin ligase complex IEP Predicted GO
CC GO:0000152 nuclear ubiquitin ligase complex IEP Predicted GO
BP GO:0000271 polysaccharide biosynthetic process IEP Predicted GO
BP GO:0000725 recombinational repair IEP Predicted GO
MF GO:0003843 1,3-beta-D-glucan synthase activity IEP Predicted GO
MF GO:0004565 beta-galactosidase activity IEP Predicted GO
MF GO:0004832 valine-tRNA ligase activity IEP Predicted GO
MF GO:0005085 guanyl-nucleotide exchange factor activity IEP Predicted GO
MF GO:0005524 ATP binding IEP Predicted GO
CC GO:0005680 anaphase-promoting complex IEP Predicted GO
BP GO:0006074 (1->3)-beta-D-glucan metabolic process IEP Predicted GO
BP GO:0006075 (1->3)-beta-D-glucan biosynthetic process IEP Predicted GO
BP GO:0006310 DNA recombination IEP Predicted GO
BP GO:0006438 valyl-tRNA aminoacylation IEP Predicted GO
MF GO:0008144 drug binding IEP Predicted GO
BP GO:0009058 biosynthetic process IEP Predicted GO
BP GO:0009250 glucan biosynthetic process IEP Predicted GO
CC GO:0009341 beta-galactosidase complex IEP Predicted GO
BP GO:0009966 regulation of signal transduction IEP Predicted GO
BP GO:0010646 regulation of cell communication IEP Predicted GO
MF GO:0015925 galactosidase activity IEP Predicted GO
MF GO:0017076 purine nucleotide binding IEP Predicted GO
CC GO:0017119 Golgi transport complex IEP Predicted GO
BP GO:0023051 regulation of signaling IEP Predicted GO
MF GO:0030554 adenyl nucleotide binding IEP Predicted GO
CC GO:0031461 cullin-RING ubiquitin ligase complex IEP Predicted GO
BP GO:0032012 regulation of ARF protein signal transduction IEP Predicted GO
MF GO:0032553 ribonucleotide binding IEP Predicted GO
MF GO:0032555 purine ribonucleotide binding IEP Predicted GO
MF GO:0032559 adenyl ribonucleotide binding IEP Predicted GO
BP GO:0033692 cellular polysaccharide biosynthetic process IEP Predicted GO
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Predicted GO
MF GO:0036094 small molecule binding IEP Predicted GO
MF GO:0043168 anion binding IEP Predicted GO
CC GO:0044431 Golgi apparatus part IEP Predicted GO
CC GO:0044459 plasma membrane part IEP Predicted GO
BP GO:0046578 regulation of Ras protein signal transduction IEP Predicted GO
BP GO:0048583 regulation of response to stimulus IEP Predicted GO
MF GO:0051020 GTPase binding IEP Predicted GO
BP GO:0051056 regulation of small GTPase mediated signal transduction IEP Predicted GO
BP GO:0051273 beta-glucan metabolic process IEP Predicted GO
BP GO:0051274 beta-glucan biosynthetic process IEP Predicted GO
MF GO:0097367 carbohydrate derivative binding IEP Predicted GO
CC GO:0098797 plasma membrane protein complex IEP Predicted GO
CC GO:1902494 catalytic complex IEP Predicted GO
BP GO:1902531 regulation of intracellular signal transduction IEP Predicted GO
CC GO:1990234 transferase complex IEP Predicted GO
InterPro domains Description Start Stop
IPR012990 Sec23_24_beta_S 740 823
IPR006895 Znf_Sec23_Sec24 420 458
IPR006900 Sec23/24_helical_dom 835 930
IPR007123 Gelsolin-like_dom 957 1014
IPR006896 Sec23/24_trunk_dom 495 735
No external refs found!