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At4g35130


Description : Pentatricopeptide repeat-containing protein At4g35130, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:O49619]


Gene families : OG_42_0000001 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Arabidopsis release: At4g35130
Cluster HCCA clusters: Cluster_192

Target Alias Description ECC score Gene Family Method Actions
94128 No alias pentatricopeptide (PPR) repeat-containing protein 0.05 Orthogroups_2024-Update
At1g06140 No alias Pentatricopeptide repeat-containing protein At1g06140,... 0.04 Orthogroups_2024-Update
At1g59720 No alias Pentatricopeptide repeat-containing protein At1g59720,... 0.04 Orthogroups_2024-Update
Bradi1g36010 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.03 Orthogroups_2024-Update
Bradi1g49477 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.03 Orthogroups_2024-Update
Bradi2g50550 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.03 Orthogroups_2024-Update
Bradi4g28137 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.04 Orthogroups_2024-Update
Brara.J00794.1 No alias Unknown function 0.03 Orthogroups_2024-Update
GRMZM2G019689 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 Orthogroups_2024-Update
GRMZM2G430710 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 Orthogroups_2024-Update
Glyma.01G159100 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.04 Orthogroups_2024-Update
Glyma.13G357000 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 Orthogroups_2024-Update
MA_42352g0010 No alias (at2g13600 : 487.0) Pentatricopeptide repeat (PPR)... 0.03 Orthogroups_2024-Update
Sobic.001G033600.2 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.004G051600.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Sobic.006G146400.4 No alias RNA editing factor *(MEF12) 0.02 Orthogroups_2024-Update
Sobic.009G155400.3 No alias Unknown function 0.02 Orthogroups_2024-Update
Solyc07g008480 No alias Pentatricopeptide repeat-containing protein (AHRD V3.3... 0.02 Orthogroups_2024-Update
evm.model.tig00001038.5 No alias no hits & (original description: no original description) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0004674 protein serine/threonine kinase activity IEP Predicted GO
BP GO:0008037 cell recognition IEP Predicted GO
MF GO:0008378 galactosyltransferase activity IEP Predicted GO
BP GO:0022414 reproductive process IEP Predicted GO
BP GO:0048544 recognition of pollen IEP Predicted GO
InterPro domains Description Start Stop
IPR032867 DYW_dom 672 793
IPR002885 Pentatricopeptide_repeat 158 194
IPR002885 Pentatricopeptide_repeat 94 140
IPR002885 Pentatricopeptide_repeat 195 239
IPR002885 Pentatricopeptide_repeat 297 336
IPR002885 Pentatricopeptide_repeat 397 424
IPR002885 Pentatricopeptide_repeat 534 561
IPR002885 Pentatricopeptide_repeat 71 92
IPR002885 Pentatricopeptide_repeat 369 396
IPR002885 Pentatricopeptide_repeat 498 526
IPR002885 Pentatricopeptide_repeat 469 493
No external refs found!