1. Home
  2. Species
  3. Setaria italica
  4. Sequence
  5. Seita.8G146900.1

Seita.8G146900.1


Description : substrate adaptor of SCF E3 ubiquitin ligase *(ADO)


Gene families : OG_42_0002411 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002411_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.8G146900.1
Cluster HCAA Clusters: Cluster_157

Target Alias Description ECC score Gene Family Method Actions
A4A49_16690 No alias adagio protein 3 0.04 Orthogroups_2024-Update
Bradi4g16630 No alias flavin-binding, kelch repeat, f box 1 0.04 Orthogroups_2024-Update
GRMZM2G106363 No alias flavin-binding, kelch repeat, f box 1 0.06 Orthogroups_2024-Update
GRMZM2G107945 No alias flavin-binding, kelch repeat, f box 1 0.04 Orthogroups_2024-Update
Glyma.05G239400 No alias flavin-binding, kelch repeat, f box 1 0.03 Orthogroups_2024-Update
Glyma.08G046500 No alias flavin-binding, kelch repeat, f box 1 0.03 Orthogroups_2024-Update
HORVU4Hr1G039300.2 No alias substrate adaptor of SCF E3 ubiquitin ligase *(ADO) 0.05 Orthogroups_2024-Update
HORVU6Hr1G022330.1 No alias substrate adaptor of SCF E3 ubiquitin ligase *(ADO) 0.03 Orthogroups_2024-Update
PSME_00048096-RA No alias (at5g57360 : 422.0) Encodes clock-associated PAS protein... 0.02 Orthogroups_2024-Update
Sobic.005G145300.1 No alias substrate adaptor of SCF E3 ubiquitin ligase *(ADO) 0.09 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA 16Dec
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004143 diacylglycerol kinase activity IEP Predicted GO
MF GO:0004150 dihydroneopterin aldolase activity IEP Predicted GO
MF GO:0004616 phosphogluconate dehydrogenase (decarboxylating) activity IEP Predicted GO
MF GO:0004652 polynucleotide adenylyltransferase activity IEP Predicted GO
MF GO:0004751 ribose-5-phosphate isomerase activity IEP Predicted GO
MF GO:0005244 voltage-gated ion channel activity IEP Predicted GO
MF GO:0005247 voltage-gated chloride channel activity IEP Predicted GO
MF GO:0005253 anion channel activity IEP Predicted GO
MF GO:0005254 chloride channel activity IEP Predicted GO
MF GO:0005337 nucleoside transmembrane transporter activity IEP Predicted GO
BP GO:0006081 cellular aldehyde metabolic process IEP Predicted GO
BP GO:0006098 pentose-phosphate shunt IEP Predicted GO
BP GO:0006575 cellular modified amino acid metabolic process IEP Predicted GO
BP GO:0006732 coenzyme metabolic process IEP Predicted GO
BP GO:0006739 NADP metabolic process IEP Predicted GO
BP GO:0006760 folic acid-containing compound metabolic process IEP Predicted GO
BP GO:0006821 chloride transport IEP Predicted GO
BP GO:0007186 G protein-coupled receptor signaling pathway IEP Predicted GO
BP GO:0007205 protein kinase C-activating G protein-coupled receptor signaling pathway IEP Predicted GO
MF GO:0008308 voltage-gated anion channel activity IEP Predicted GO
BP GO:0009052 pentose-phosphate shunt, non-oxidative branch IEP Predicted GO
MF GO:0015103 inorganic anion transmembrane transporter activity IEP Predicted GO
MF GO:0015108 chloride transmembrane transporter activity IEP Predicted GO
BP GO:0015858 nucleoside transport IEP Predicted GO
MF GO:0015932 nucleobase-containing compound transmembrane transporter activity IEP Predicted GO
MF GO:0016491 oxidoreductase activity IEP Predicted GO
MF GO:0016832 aldehyde-lyase activity IEP Predicted GO
MF GO:0016860 intramolecular oxidoreductase activity IEP Predicted GO
MF GO:0016861 intramolecular oxidoreductase activity, interconverting aldoses and ketoses IEP Predicted GO
BP GO:0019682 glyceraldehyde-3-phosphate metabolic process IEP Predicted GO
BP GO:0019693 ribose phosphate metabolic process IEP Predicted GO
MF GO:0022832 voltage-gated channel activity IEP Predicted GO
BP GO:0042558 pteridine-containing compound metabolic process IEP Predicted GO
MF GO:0043565 sequence-specific DNA binding IEP Predicted GO
BP GO:0043631 RNA polyadenylation IEP Predicted GO
BP GO:0051156 glucose 6-phosphate metabolic process IEP Predicted GO
BP GO:0051186 cofactor metabolic process IEP Predicted GO
MF GO:0070566 adenylyltransferase activity IEP Predicted GO
BP GO:1901264 carbohydrate derivative transport IEP Predicted GO
MF GO:1901505 carbohydrate derivative transmembrane transporter activity IEP Predicted GO
BP GO:1901642 nucleoside transmembrane transport IEP Predicted GO
InterPro domains Description Start Stop
IPR000014 PAS 17 115
IPR001810 F-box_dom 165 205
IPR011498 Kelch_2 477 524
No external refs found!