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  5. Seita.8G153400.1

Seita.8G153400.1


Description : Unknown function


Gene families : OG_42_0000172 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000172_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.8G153400.1
Cluster HCAA Clusters: Cluster_279

Target Alias Description ECC score Gene Family Method Actions
Bradi3g41810 No alias disease resistance family protein / LRR family protein 0.04 Orthogroups_2024-Update
HORVU5Hr1G087410.3 No alias Unknown function 0.02 Orthogroups_2024-Update
HORVU6Hr1G009100.1 No alias Unknown function 0.02 Orthogroups_2024-Update
HORVU6Hr1G009180.2 No alias Unknown function 0.02 Orthogroups_2024-Update
HORVU7Hr1G006610.3 No alias Unknown function 0.03 Orthogroups_2024-Update
LOC_Os11g36020 No alias leucine rich repeat protein, putative, expressed 0.03 Orthogroups_2024-Update
Seita.5G215800.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Seita.5G215900.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Seita.8G055500.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Seita.8G237800.1 No alias Unknown function 0.01 Orthogroups_2024-Update
Sobic.007G185000.2 No alias Unknown function 0.01 Orthogroups_2024-Update
Sobic.009G012900.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.010G130700.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Sopen01g042800 No alias Leucine rich repeat N-terminal domain 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA 16Dec
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Type GO Term Name Evidence Source
BP GO:0000041 transition metal ion transport IEP Predicted GO
MF GO:0003905 alkylbase DNA N-glycosylase activity IEP Predicted GO
MF GO:0005375 copper ion transmembrane transporter activity IEP Predicted GO
CC GO:0005811 lipid droplet IEP Predicted GO
BP GO:0006825 copper ion transport IEP Predicted GO
MF GO:0008725 DNA-3-methyladenine glycosylase activity IEP Predicted GO
CC GO:0012511 monolayer-surrounded lipid storage body IEP Predicted GO
MF GO:0019104 DNA N-glycosylase activity IEP Predicted GO
BP GO:0035434 copper ion transmembrane transport IEP Predicted GO
MF GO:0043733 DNA-3-methylbase glycosylase activity IEP Predicted GO
MF GO:0046915 transition metal ion transmembrane transporter activity IEP Predicted GO
InterPro domains Description Start Stop
IPR001611 Leu-rich_rpt 183 233
No external refs found!