Seita.8G161800.1

Description : Unknown function

Gene families : OG_42_0001160 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001160_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Setaria italica: Seita.8G161800.1
Cluster	HCAA Clusters: Cluster_255

Target	Alias	Description	ECC score	Gene Family Method	Actions
Sopen01g016800	No alias	Pumilio-family RNA binding repeat	0.04	Orthogroups_2024-Update
evm.model.tig00020878.26	No alias	(at5g56510 : 284.0) Encodes a member of the Arabidopsis...	0.02	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003723	RNA binding	IEA	16Dec
MF	GO:0005488	binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR001313	Pumilio_RNA-bd_rpt	586	619
IPR001313	Pumilio_RNA-bd_rpt	476	507
IPR001313	Pumilio_RNA-bd_rpt	623	639
IPR001313	Pumilio_RNA-bd_rpt	657	690
IPR001313	Pumilio_RNA-bd_rpt	550	580
IPR001313	Pumilio_RNA-bd_rpt	516	545
IPR001313	Pumilio_RNA-bd_rpt	441	474
IPR001313	Pumilio_RNA-bd_rpt	697	722

External Links

No external refs found!