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  5. Seita.8G172700.1

Seita.8G172700.1


Description : Unknown function


Gene families : OG_42_0000043 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000043_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.8G172700.1
Cluster HCAA Clusters: Cluster_263

Target Alias Description ECC score Gene Family Method Actions
8109 No alias RING/U-box superfamily protein 0.02 Orthogroups_2024-Update
A4A49_21563 No alias e3 ubiquitin-protein ligase ring1 0.02 Orthogroups_2024-Update
A4A49_41488 No alias e3 ubiquitin-protein ligase rduf1 0.04 Orthogroups_2024-Update
A4A49_41691 No alias e3 ubiquitin-protein ligase sdir1 0.03 Orthogroups_2024-Update
At1g26800 No alias E3 ubiquitin-protein ligase MPSR1... 0.04 Orthogroups_2024-Update
At3g13228 No alias RING/U-box superfamily protein... 0.07 Orthogroups_2024-Update
At3g30460 No alias RING/U-box superfamily protein... 0.03 Orthogroups_2024-Update
At3g60080 No alias At3g60080 [Source:UniProtKB/TrEMBL;Acc:Q9M1D5] 0.02 Orthogroups_2024-Update
At5g01980 No alias At5g01980 [Source:UniProtKB/TrEMBL;Acc:Q9LZN3] 0.03 Orthogroups_2024-Update
Bradi1g52440 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
Bradi3g37800 No alias RING/U-box superfamily protein 0.02 Orthogroups_2024-Update
Brara.A02841.1 No alias RING-H2-class BTL-subclass E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
Brara.C00964.1 No alias signal transducer of abscisic acid perception *(AIP2) 0.04 Orthogroups_2024-Update
Brara.C02094.1 No alias RING-H2-class BTL-subclass E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
Brara.E02211.1 No alias RING-H2-class BTL-subclass E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
Brara.G00930.1 No alias E3 ubiquitin ligase *(SNIPER) 0.03 Orthogroups_2024-Update
Brara.G02768.1 No alias Unknown function 0.06 Orthogroups_2024-Update
Brara.H00234.1 No alias RING-H2-class BTL-subclass E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
Brara.I05006.1 No alias E3 ubiquitin ligase *(SNIPER) 0.03 Orthogroups_2024-Update
Cre10.g422050 No alias RING/U-box superfamily protein 0.01 Orthogroups_2024-Update
GRMZM2G122848 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
GRMZM2G157855 No alias RING/U-box superfamily protein 0.04 Orthogroups_2024-Update
GRMZM2G164358 No alias RING-H2 finger C1A 0.02 Orthogroups_2024-Update
GRMZM2G168690 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
Glyma.02G108300 No alias RING/U-box superfamily protein 0.02 Orthogroups_2024-Update
Glyma.04G251600 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
Glyma.10G089800 No alias RING/U-box superfamily protein 0.04 Orthogroups_2024-Update
Glyma.13G072800 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
HORVU0Hr1G002870.3 No alias Unknown function 0.04 Orthogroups_2024-Update
HORVU0Hr1G019650.1 No alias Unknown function 0.03 Orthogroups_2024-Update
HORVU5Hr1G046250.24 No alias RING-H2-class BTL-subclass E3 ubiquitin ligase 0.04 Orthogroups_2024-Update
HORVU6Hr1G080320.4 No alias Unknown function 0.03 Orthogroups_2024-Update
HORVU7Hr1G092570.1 No alias Unknown function 0.03 Orthogroups_2024-Update
LOC_Os01g58780 No alias zinc finger, C3HC4 type domain containing protein, expressed 0.02 Orthogroups_2024-Update
LOC_Os03g26420 No alias zinc finger, C3HC4 type domain containing protein, expressed 0.03 Orthogroups_2024-Update
LOC_Os05g41520 No alias zinc finger, C3HC4 type domain containing protein, expressed 0.04 Orthogroups_2024-Update
LOC_Os06g01200 No alias zinc finger, C3HC4 type domain containing protein, expressed 0.03 Orthogroups_2024-Update
LOC_Os07g43740 No alias zinc finger, C3HC4 type domain containing protein, expressed 0.05 Orthogroups_2024-Update
LOC_Os09g06740 No alias zinc finger, C3HC4 type domain containing protein, expressed 0.03 Orthogroups_2024-Update
LOC_Os09g06770 No alias RING finger protein, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os11g02670 No alias zinc finger, C3HC4 type domain containing protein, expressed 0.03 Orthogroups_2024-Update
LOC_Os11g37230 No alias zinc finger, C3HC4 type domain containing protein, expressed 0.03 Orthogroups_2024-Update
LOC_Os12g04090 No alias zinc finger, C3HC4 type domain containing protein 0.03 Orthogroups_2024-Update
LOC_Os12g04450 No alias zinc finger, C3HC4 type domain containing protein, expressed 0.03 Orthogroups_2024-Update
LOC_Os12g04660 No alias zinc finger, C3HC4 type domain containing protein, expressed 0.03 Orthogroups_2024-Update
MA_10428335g0020 No alias (at3g19950 : 167.0) RING/U-box superfamily protein;... 0.03 Orthogroups_2024-Update
MA_110029g0010 No alias (at1g55530 : 173.0) RING/U-box superfamily protein;... 0.03 Orthogroups_2024-Update
MA_474338g0010 No alias (at2g39720 : 83.2) Encodes a putative RING-H2 finger... 0.04 Orthogroups_2024-Update
MA_61067g0010 No alias (at5g08139 : 94.4) RING/U-box superfamily protein;... 0.02 Orthogroups_2024-Update
MA_77269g0010 No alias (at3g46620 : 139.0) zinc finger (C3HC4-type RING finger)... 0.03 Orthogroups_2024-Update
MA_79051g0010 No alias (at3g19950 : 171.0) RING/U-box superfamily protein;... 0.03 Orthogroups_2024-Update
Mp7g04520.1 No alias no hits & (original description: none) 0.04 Orthogroups_2024-Update
PSME_00054449-RA No alias (at2g40830 : 144.0) Encodes a putative RING-H2 finger... 0.02 Orthogroups_2024-Update
PSME_00056956-RA No alias (at2g40830 : 186.0) Encodes a putative RING-H2 finger... 0.02 Orthogroups_2024-Update
Potri.005G062400 No alias RING/U-box superfamily protein 0.04 Orthogroups_2024-Update
Potri.006G164500 No alias COP1-interacting protein 8 0.02 Orthogroups_2024-Update
Potri.006G217600 No alias RING/U-box superfamily protein 0.02 Orthogroups_2024-Update
Seita.1G054700.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Seita.1G332400.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Seita.2G181600.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Seita.5G351000.1 No alias RING-H2-class BTL-subclass E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
Seita.8G172800.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Sobic.001G371300.1 No alias RING-H2-class BTL-subclass E3 ubiquitin ligase 0.06 Orthogroups_2024-Update
Sobic.002G386000.1 No alias Unknown function 0.05 Orthogroups_2024-Update
Sobic.004G074600.2 No alias Unknown function 0.02 Orthogroups_2024-Update
Sobic.004G332500.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.005G015450.1 No alias gibberellin modification enzyme *(ELA) & EC_1.14... 0.03 Orthogroups_2024-Update
Sobic.005G055501.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.005G165900.1 No alias Unknown function 0.05 Orthogroups_2024-Update
Sobic.008G028900.2 No alias Unknown function 0.03 Orthogroups_2024-Update
Solyc01g009000 No alias RING/U-box superfamily protein (AHRD V3.3 *** AT3G56580.3) 0.04 Orthogroups_2024-Update
Solyc04g005760 No alias LOW QUALITY:RING/U-box superfamily protein (AHRD V3.3... 0.03 Orthogroups_2024-Update
Solyc08g067290 No alias RING/U-box superfamily protein (AHRD V3.3 *** AT5G20910.1) 0.03 Orthogroups_2024-Update
Solyc12g008480 No alias RING/U-box superfamily protein (AHRD V3.3 *-* AT1G60360.1) 0.02 Orthogroups_2024-Update
Sopen02g015860 No alias Ring finger domain 0.02 Orthogroups_2024-Update
Sopen02g034170 No alias Ring finger domain 0.02 Orthogroups_2024-Update
Sopen03g029300 No alias Ring finger domain 0.02 Orthogroups_2024-Update
Sopen05g003750 No alias Ring finger domain 0.03 Orthogroups_2024-Update
evm.model.contig_3384.9 No alias no hits & (original description: no original description) 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Predicted GO
MF GO:0003674 molecular_function IEP Predicted GO
MF GO:0003700 DNA-binding transcription factor activity IEP Predicted GO
MF GO:0004672 protein kinase activity IEP Predicted GO
MF GO:0005216 ion channel activity IEP Predicted GO
MF GO:0005488 binding IEP Predicted GO
MF GO:0005515 protein binding IEP Predicted GO
MF GO:0005524 ATP binding IEP Predicted GO
BP GO:0006355 regulation of transcription, DNA-templated IEP Predicted GO
BP GO:0006464 cellular protein modification process IEP Predicted GO
BP GO:0006468 protein phosphorylation IEP Predicted GO
BP GO:0006793 phosphorus metabolic process IEP Predicted GO
BP GO:0006796 phosphate-containing compound metabolic process IEP Predicted GO
MF GO:0008144 drug binding IEP Predicted GO
BP GO:0009889 regulation of biosynthetic process IEP Predicted GO
BP GO:0010468 regulation of gene expression IEP Predicted GO
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Predicted GO
MF GO:0015267 channel activity IEP Predicted GO
MF GO:0015276 ligand-gated ion channel activity IEP Predicted GO
MF GO:0016301 kinase activity IEP Predicted GO
BP GO:0016310 phosphorylation IEP Predicted GO
MF GO:0016740 transferase activity IEP Predicted GO
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Predicted GO
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Predicted GO
MF GO:0017076 purine nucleotide binding IEP Predicted GO
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Predicted GO
BP GO:0019222 regulation of metabolic process IEP Predicted GO
BP GO:0019538 protein metabolic process IEP Predicted GO
MF GO:0022803 passive transmembrane transporter activity IEP Predicted GO
MF GO:0022834 ligand-gated channel activity IEP Predicted GO
MF GO:0022838 substrate-specific channel activity IEP Predicted GO
MF GO:0030554 adenyl nucleotide binding IEP Predicted GO
BP GO:0031323 regulation of cellular metabolic process IEP Predicted GO
BP GO:0031326 regulation of cellular biosynthetic process IEP Predicted GO
MF GO:0032553 ribonucleotide binding IEP Predicted GO
MF GO:0032555 purine ribonucleotide binding IEP Predicted GO
MF GO:0032559 adenyl ribonucleotide binding IEP Predicted GO
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Predicted GO
MF GO:0036094 small molecule binding IEP Predicted GO
BP GO:0036211 protein modification process IEP Predicted GO
MF GO:0043167 ion binding IEP Predicted GO
MF GO:0043168 anion binding IEP Predicted GO
BP GO:0043170 macromolecule metabolic process IEP Predicted GO
BP GO:0043412 macromolecule modification IEP Predicted GO
MF GO:0043565 sequence-specific DNA binding IEP Predicted GO
BP GO:0044260 cellular macromolecule metabolic process IEP Predicted GO
BP GO:0044267 cellular protein metabolic process IEP Predicted GO
BP GO:0050789 regulation of biological process IEP Predicted GO
BP GO:0050794 regulation of cellular process IEP Predicted GO
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Predicted GO
BP GO:0051252 regulation of RNA metabolic process IEP Predicted GO
BP GO:0060255 regulation of macromolecule metabolic process IEP Predicted GO
BP GO:0065007 biological regulation IEP Predicted GO
BP GO:0080090 regulation of primary metabolic process IEP Predicted GO
MF GO:0097159 organic cyclic compound binding IEP Predicted GO
MF GO:0097367 carbohydrate derivative binding IEP Predicted GO
MF GO:0140096 catalytic activity, acting on a protein IEP Predicted GO
MF GO:0140110 transcription regulator activity IEP Predicted GO
MF GO:1901265 nucleoside phosphate binding IEP Predicted GO
MF GO:1901363 heterocyclic compound binding IEP Predicted GO
BP GO:1901564 organonitrogen compound metabolic process IEP Predicted GO
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Predicted GO
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Predicted GO
BP GO:2001141 regulation of RNA biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR001841 Znf_RING 146 188
No external refs found!