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  5. Seita.8G172800.1

Seita.8G172800.1


Description : Unknown function


Gene families : OG_42_0000043 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000043_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.8G172800.1

Target Alias Description ECC score Gene Family Method Actions
At3g13228 No alias RING/U-box superfamily protein... 0.03 Orthogroups_2024-Update
Brara.C00961.1 No alias signal transducer of abscisic acid perception *(AIP2) 0.02 Orthogroups_2024-Update
Brara.G00930.1 No alias E3 ubiquitin ligase *(SNIPER) 0.02 Orthogroups_2024-Update
Brara.H00234.1 No alias RING-H2-class BTL-subclass E3 ubiquitin ligase 0.02 Orthogroups_2024-Update
GRMZM2G164358 No alias RING-H2 finger C1A 0.01 Orthogroups_2024-Update
HORVU6Hr1G080320.4 No alias Unknown function 0.03 Orthogroups_2024-Update
LOC_Os01g58780 No alias zinc finger, C3HC4 type domain containing protein, expressed 0.03 Orthogroups_2024-Update
LOC_Os02g49550 No alias zinc finger, C3HC4 type domain containing protein, expressed 0.01 Orthogroups_2024-Update
LOC_Os07g43740 No alias zinc finger, C3HC4 type domain containing protein, expressed 0.04 Orthogroups_2024-Update
LOC_Os11g02670 No alias zinc finger, C3HC4 type domain containing protein, expressed 0.02 Orthogroups_2024-Update
LOC_Os11g04281 No alias zinc finger, C3HC4 type domain containing protein 0.02 Orthogroups_2024-Update
LOC_Os11g04680 No alias zinc finger, C3HC4 type domain containing protein, expressed 0.02 Orthogroups_2024-Update
LOC_Os11g04690 No alias zinc finger, C3HC4 type domain containing protein, expressed 0.02 Orthogroups_2024-Update
LOC_Os12g04660 No alias zinc finger, C3HC4 type domain containing protein, expressed 0.02 Orthogroups_2024-Update
MA_433917g0010 No alias (at2g40830 : 92.0) Encodes a putative RING-H2 finger... 0.01 Orthogroups_2024-Update
MA_61067g0010 No alias (at5g08139 : 94.4) RING/U-box superfamily protein;... 0.03 Orthogroups_2024-Update
MA_9328282g0010 No alias (at5g01980 : 161.0) RING/U-box superfamily protein;... 0.04 Orthogroups_2024-Update
Potri.005G062400 No alias RING/U-box superfamily protein 0.02 Orthogroups_2024-Update
Potri.006G164500 No alias COP1-interacting protein 8 0.02 Orthogroups_2024-Update
Seita.6G176300.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Seita.8G172700.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Sobic.001G371300.1 No alias RING-H2-class BTL-subclass E3 ubiquitin ligase 0.02 Orthogroups_2024-Update
Sobic.002G386000.1 No alias Unknown function 0.01 Orthogroups_2024-Update
Sobic.005G015450.1 No alias gibberellin modification enzyme *(ELA) & EC_1.14... 0.06 Orthogroups_2024-Update
Sobic.005G055501.1 No alias Unknown function 0.01 Orthogroups_2024-Update
Sobic.008G028900.2 No alias Unknown function 0.01 Orthogroups_2024-Update
Solyc01g009000 No alias RING/U-box superfamily protein (AHRD V3.3 *** AT3G56580.3) 0.02 Orthogroups_2024-Update
Solyc04g005760 No alias LOW QUALITY:RING/U-box superfamily protein (AHRD V3.3... 0.01 Orthogroups_2024-Update
Solyc09g059130 No alias LOW QUALITY:RING/U-box superfamily protein (AHRD V3.3... 0.01 Orthogroups_2024-Update
Sopen02g034170 No alias Ring finger domain 0.03 Orthogroups_2024-Update
Sopen07g026890 No alias Ring finger domain 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001841 Znf_RING 145 186
No external refs found!