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  5. Seita.8G176000.1

Seita.8G176000.1


Description : Unknown function


Gene families : OG_42_0003779 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0003779_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.8G176000.1
Cluster HCAA Clusters: Cluster_102

Target Alias Description ECC score Gene Family Method Actions
Bradi4g14270 No alias Calcium-binding EF-hand family protein 0.04 Orthogroups_2024-Update
Bradi4g30100 No alias Calcium-binding EF-hand family protein 0.03 Orthogroups_2024-Update
GRMZM2G157241 No alias Calcium-binding EF-hand family protein 0.08 Orthogroups_2024-Update
Potri.004G122900 No alias Calcium-binding EF-hand family protein 0.05 Orthogroups_2024-Update
Potri.017G084800 No alias Calcium-binding EF-hand family protein 0.03 Orthogroups_2024-Update
Sobic.002G199500.1 No alias calcium sensor *(CML) 0.05 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0001871 pattern binding IEP Predicted GO
MF GO:0003849 3-deoxy-7-phosphoheptulonate synthase activity IEP Predicted GO
MF GO:0004813 alanine-tRNA ligase activity IEP Predicted GO
MF GO:0005543 phospholipid binding IEP Predicted GO
BP GO:0006419 alanyl-tRNA aminoacylation IEP Predicted GO
BP GO:0006464 cellular protein modification process IEP Predicted GO
BP GO:0006486 protein glycosylation IEP Predicted GO
BP GO:0006520 cellular amino acid metabolic process IEP Predicted GO
BP GO:0006812 cation transport IEP Predicted GO
MF GO:0008194 UDP-glycosyltransferase activity IEP Predicted GO
MF GO:0008289 lipid binding IEP Predicted GO
MF GO:0008324 cation transmembrane transporter activity IEP Predicted GO
BP GO:0009072 aromatic amino acid family metabolic process IEP Predicted GO
BP GO:0009073 aromatic amino acid family biosynthetic process IEP Predicted GO
MF GO:0016740 transferase activity IEP Predicted GO
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Predicted GO
MF GO:0016758 transferase activity, transferring hexosyl groups IEP Predicted GO
MF GO:0022890 inorganic cation transmembrane transporter activity IEP Predicted GO
MF GO:0030246 carbohydrate binding IEP Predicted GO
MF GO:0030247 polysaccharide binding IEP Predicted GO
BP GO:0036211 protein modification process IEP Predicted GO
MF GO:0043168 anion binding IEP Predicted GO
BP GO:0043412 macromolecule modification IEP Predicted GO
BP GO:0043413 macromolecule glycosylation IEP Predicted GO
BP GO:0070085 glycosylation IEP Predicted GO
InterPro domains Description Start Stop
IPR002048 EF_hand_dom 131 190
No external refs found!