Seita.8G179800.1

Description : alpha amylase

Gene families : OG_42_0000605 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000605_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Setaria italica: Seita.8G179800.1
Cluster	HCAA Clusters: Cluster_132

Target	Alias	Description	ECC score	Gene Family Method
At4g25000	No alias	Alpha-amylase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q8VZ56]	0.04	Orthogroups_2024-Update
Cre08.g384750	No alias	alpha-amylase-like 3	0.01	Orthogroups_2024-Update
Glyma.14G222600	No alias	alpha-amylase-like 2	0.03	Orthogroups_2024-Update
LOC_Os04g33040	No alias	alpha-amylase precursor, putative, expressed	0.02	Orthogroups_2024-Update
LOC_Os09g28400	No alias	alpha-amylase precursor, putative, expressed	0.03	Orthogroups_2024-Update
MA_30833g0020	No alias	(p27933\|amy3d_orysa : 533.0) Alpha-amylase isozyme 3D...	0.03	Orthogroups_2024-Update
Mp3g22820.1	No alias	alpha amylase	0.03	Orthogroups_2024-Update
Potri.002G126300	No alias	alpha-amylase-like	0.03	Orthogroups_2024-Update
Pp1s100_191V6	No alias	at1g69830 t17f3_14	0.02	Orthogroups_2024-Update
Seita.4G191200.1	No alias	alpha amylase	0.05	Orthogroups_2024-Update
Sobic.002G190500.1	No alias	alpha amylase	0.03	Orthogroups_2024-Update
Sobic.007G156400.1	No alias	alpha amylase	0.04	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	None	Extended
MF	GO:0004556	alpha-amylase activity	IEA	16Dec
MF	GO:0005488	binding	None	Extended
MF	GO:0005509	calcium ion binding	IEA	16Dec
BP	GO:0005975	carbohydrate metabolic process	IEA	16Dec
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0016160	amylase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016798	hydrolase activity, acting on glycosyl bonds	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0010333	terpene synthase activity	IEP	Predicted GO
MF	GO:0016838	carbon-oxygen lyase activity, acting on phosphates	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR006047	Glyco_hydro_13_cat_dom	49	224
IPR012850	A-amylase_bs_C	367	425

External Links

No external refs found!