1. Home
  2. Species
  3. Setaria italica
  4. Sequence
  5. Seita.8G187000.1

Seita.8G187000.1


Description : 14-3-3 phosphoprotein-binding protein *(GRF)


Gene families : OG_42_0000274 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000274_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.8G187000.1
Cluster HCAA Clusters: Cluster_220

Target Alias Description ECC score Gene Family Method Actions
Bradi3g46960 No alias
  • general regulatory factor 7
    		•  0.08 Orthogroups_2024-Update
    Sopen12g029760 No alias 14-3-3 protein 0.02 Orthogroups_2024-Update

    Type GO Term Name Evidence Source

    No GO annotation available for this sequence
    Toggle parental
    Type GO Term Name Evidence Source
    BP GO:0000154 rRNA modification IEP Predicted GO
    BP GO:0001510 RNA methylation IEP Predicted GO
    BP GO:0006364 rRNA processing IEP Predicted GO
    BP GO:0006396 RNA processing IEP Predicted GO
    MF GO:0008170 N-methyltransferase activity IEP Predicted GO
    MF GO:0008173 RNA methyltransferase activity IEP Predicted GO
    MF GO:0008649 rRNA methyltransferase activity IEP Predicted GO
    MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP Predicted GO
    BP GO:0009451 RNA modification IEP Predicted GO
    BP GO:0016072 rRNA metabolic process IEP Predicted GO
    MF GO:0016436 rRNA (uridine) methyltransferase activity IEP Predicted GO
    BP GO:0031167 rRNA methylation IEP Predicted GO
    BP GO:0032259 methylation IEP Predicted GO
    BP GO:0034470 ncRNA processing IEP Predicted GO
    BP GO:0034660 ncRNA metabolic process IEP Predicted GO
    BP GO:0043414 macromolecule methylation IEP Predicted GO
    MF GO:0070042 rRNA (uridine-N3-)-methyltransferase activity IEP Predicted GO
    BP GO:0070475 rRNA base methylation IEP Predicted GO
    MF GO:0140102 catalytic activity, acting on a rRNA IEP Predicted GO
    InterPro domains Description Start Stop
    IPR023410 14-3-3_domain 10 230
    No external refs found!