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  5. Seita.8G230000.1

Seita.8G230000.1


Description : bifunctional alpha-L-arabinofuranosidase and beta-D-xylosidase *(BXL) & EC_3.2 glycosylase


Gene families : OG_42_0000397 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000397_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.8G230000.1
Cluster HCAA Clusters: Cluster_86

Target Alias Description ECC score Gene Family Method Actions
A4A49_10220 No alias beta-xylosidasealpha-l-arabinofuranosidase 2 0.03 Orthogroups_2024-Update
Bradi3g59020 No alias Glycosyl hydrolase family protein 0.06 Orthogroups_2024-Update
Bradi4g16026 No alias Glycosyl hydrolase family protein 0.03 Orthogroups_2024-Update
Bradi5g23470 No alias beta-D-xylosidase 4 0.02 Orthogroups_2024-Update
HORVU4Hr1G003910.1 No alias bifunctional alpha-L-arabinofuranosidase and... 0.03 Orthogroups_2024-Update
MA_77922g0010 No alias (at5g64570 : 973.0) Encodes a beta-d-xylosidase that... 0.02 Orthogroups_2024-Update
PSME_00023147-RA No alias (at5g64570 : 870.0) Encodes a beta-d-xylosidase that... 0.02 Orthogroups_2024-Update
Potri.002G093900 No alias Glycosyl hydrolase family protein 0.02 Orthogroups_2024-Update
Potri.005G168500 No alias Glycosyl hydrolase family protein 0.02 Orthogroups_2024-Update
Sopen10g016980 No alias Glycosyl hydrolase family 3 N terminal domain 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEA 16Dec
BP GO:0005975 carbohydrate metabolic process IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0002161 aminoacyl-tRNA editing activity IEP Predicted GO
CC GO:0005576 extracellular region IEP Predicted GO
CC GO:0005618 cell wall IEP Predicted GO
BP GO:0006486 protein glycosylation IEP Predicted GO
MF GO:0016758 transferase activity, transferring hexosyl groups IEP Predicted GO
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP Predicted GO
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Predicted GO
CC GO:0030312 external encapsulating structure IEP Predicted GO
MF GO:0035673 oligopeptide transmembrane transporter activity IEP Predicted GO
MF GO:0042887 amide transmembrane transporter activity IEP Predicted GO
BP GO:0043413 macromolecule glycosylation IEP Predicted GO
CC GO:0048046 apoplast IEP Predicted GO
BP GO:0070085 glycosylation IEP Predicted GO
MF GO:1904680 peptide transmembrane transporter activity IEP Predicted GO
InterPro domains Description Start Stop
IPR001764 Glyco_hydro_3_N 104 347
IPR002772 Glyco_hydro_3_C 393 630
IPR026891 Fn3-like 700 767
No external refs found!