Seita.8G234500.1


Description : Unknown function


Gene families : OG_42_0000039 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000039_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.8G234500.1
Cluster HCAA Clusters: Cluster_333

Target Alias Description ECC score Gene Family Method Actions
A4A49_34434 No alias putative disease resistance rpp13-like protein 1 0.03 Orthogroups_2024-Update
Glyma.03G048100 No alias disease resistance protein (TIR-NBS-LRR class) 0.02 Orthogroups_2024-Update
Glyma.03G048301 No alias disease resistance protein (TIR-NBS-LRR class) 0.03 Orthogroups_2024-Update
Glyma.19G134200 No alias LRR and NB-ARC domains-containing disease resistance protein 0.02 Orthogroups_2024-Update
Glyma.19G138301 No alias NB-ARC domain-containing disease resistance protein 0.02 Orthogroups_2024-Update
HORVU1Hr1G002440.2 No alias Unknown function 0.05 Orthogroups_2024-Update
HORVU2Hr1G126440.1 No alias Unknown function 0.05 Orthogroups_2024-Update
HORVU3Hr1G113690.11 No alias Unknown function 0.03 Orthogroups_2024-Update
HORVU7Hr1G000760.3 No alias Unknown function 0.03 Orthogroups_2024-Update
HORVU7Hr1G026360.1 No alias Unknown function 0.03 Orthogroups_2024-Update
HORVU7Hr1G117690.6 No alias Unknown function 0.04 Orthogroups_2024-Update
LOC_Os01g25630 No alias NB-ARC domain containing protein, expressed 0.03 Orthogroups_2024-Update
LOC_Os03g63200 No alias powdery mildew resistance protein PM3b, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os07g10560 No alias expressed protein 0.03 Orthogroups_2024-Update
LOC_Os08g16460 No alias NBS-LRR disease resistance protein, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os10g07400 No alias disease resistance RPP13-like protein 1, putative, expressed 0.02 Orthogroups_2024-Update
Potri.001G029300 No alias LRR and NB-ARC domains-containing disease resistance protein 0.02 Orthogroups_2024-Update
Potri.003G198900 No alias LRR and NB-ARC domains-containing disease resistance protein 0.02 Orthogroups_2024-Update
Potri.017G123500 No alias NB-ARC domain-containing disease resistance protein 0.03 Orthogroups_2024-Update
Potri.018G080700 No alias NB-ARC domain-containing disease resistance protein 0.03 Orthogroups_2024-Update
Seita.4G250500.1 No alias Unknown function 0.01 Orthogroups_2024-Update
Seita.6G233400.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Seita.6G235800.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Seita.J024800.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.005G197400.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.008G101000.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Solyc11g065790 No alias Disease resistance protein I2 (AHRD V3.3 *-* Q9XET3_SOLLC) 0.03 Orthogroups_2024-Update
Solyc11g065810 No alias Disease resistance protein (AHRD V3.3 *-* B3IYJ6_CAPCH) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
CC GO:0000347 THO complex IEP Predicted GO
CC GO:0000445 THO complex part of transcription export complex IEP Predicted GO
MF GO:0005507 copper ion binding IEP Predicted GO
MF GO:0008234 cysteine-type peptidase activity IEP Predicted GO
BP GO:0009116 nucleoside metabolic process IEP Predicted GO
BP GO:0019321 pentose metabolic process IEP Predicted GO
BP GO:0019566 arabinose metabolic process IEP Predicted GO
BP GO:0046373 L-arabinose metabolic process IEP Predicted GO
MF GO:0046556 alpha-L-arabinofuranosidase activity IEP Predicted GO
BP GO:1901657 glycosyl compound metabolic process IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!