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  5. Seita.8G250200.1

Seita.8G250200.1


Description : GRAS-type transcription factor


Gene families : OG_42_0000237 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000237_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.8G250200.1
Cluster HCAA Clusters: Cluster_210

Target Alias Description ECC score Gene Family Method Actions
A4A49_41610 No alias scarecrow-like protein 14 0.02 Orthogroups_2024-Update
Brara.D01740.1 No alias GRAS-type transcription factor 0.03 Orthogroups_2024-Update
Glyma.12G061900 No alias SCARECROW-like 14 0.03 Orthogroups_2024-Update
HORVU4Hr1G027340.3 No alias GRAS-type transcription factor 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Predicted GO
MF GO:0003909 DNA ligase activity IEP Predicted GO
MF GO:0003910 DNA ligase (ATP) activity IEP Predicted GO
MF GO:0004045 aminoacyl-tRNA hydrolase activity IEP Predicted GO
MF GO:0004518 nuclease activity IEP Predicted GO
MF GO:0004527 exonuclease activity IEP Predicted GO
MF GO:0005484 SNAP receptor activity IEP Predicted GO
CC GO:0005694 chromosome IEP Predicted GO
BP GO:0006259 DNA metabolic process IEP Predicted GO
BP GO:0006310 DNA recombination IEP Predicted GO
BP GO:0006890 retrograde vesicle-mediated transport, Golgi to ER IEP Predicted GO
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP Predicted GO
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Predicted GO
MF GO:0016886 ligase activity, forming phosphoric ester bonds IEP Predicted GO
BP GO:0048193 Golgi vesicle transport IEP Predicted GO
MF GO:0070403 NAD+ binding IEP Predicted GO
CC GO:0071203 WASH complex IEP Predicted GO
InterPro domains Description Start Stop
IPR005202 TF_GRAS 259 593
No external refs found!