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  5. Seita.8G251100.1

Seita.8G251100.1


Description : regulatory protein *(CYCD) of cell cycle


Gene families : OG_42_0000136 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000136_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.8G251100.1
Cluster HCAA Clusters: Cluster_111

Target Alias Description ECC score Gene Family Method Actions
A4A49_24040 No alias cyclin-d2-1 0.02 Orthogroups_2024-Update
Brara.G01181.1 No alias regulatory protein *(CYCD) of cell cycle 0.02 Orthogroups_2024-Update
GRMZM2G047637 No alias CYCLIN D1;1 0.03 Orthogroups_2024-Update
Glyma.04G045500 No alias cyclin d5;1 0.02 Orthogroups_2024-Update
HORVU3Hr1G105610.3 No alias Unknown function 0.03 Orthogroups_2024-Update
HORVU4Hr1G013700.8 No alias Unknown function 0.04 Orthogroups_2024-Update
LOC_Os03g42070 No alias cyclin, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os07g42860 No alias cyclin, putative, expressed 0.03 Orthogroups_2024-Update
PSME_00003592-RA No alias (at4g34160 : 230.0) encodes a cyclin D-type protein... 0.03 Orthogroups_2024-Update
Potri.008G146600 No alias CYCLIN D1;1 0.03 Orthogroups_2024-Update
Potri.014G016700 No alias cyclin d5;1 0.03 Orthogroups_2024-Update
Seita.2G236100.1 No alias regulatory protein *(CYCD) of cell cycle 0.02 Orthogroups_2024-Update
Seita.6G185800.1 No alias regulatory protein *(CYCD) of cell cycle 0.03 Orthogroups_2024-Update
Sobic.001G349600.2 No alias regulatory protein *(CYCD) of cell cycle 0.03 Orthogroups_2024-Update
Solyc05g006050 No alias cyclinD1_1 0.02 Orthogroups_2024-Update
Sopen12g030550 No alias Cyclin, N-terminal domain 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000347 THO complex IEP Predicted GO
CC GO:0000445 THO complex part of transcription export complex IEP Predicted GO
BP GO:0009116 nucleoside metabolic process IEP Predicted GO
BP GO:0019321 pentose metabolic process IEP Predicted GO
BP GO:0019566 arabinose metabolic process IEP Predicted GO
BP GO:0046373 L-arabinose metabolic process IEP Predicted GO
MF GO:0046556 alpha-L-arabinofuranosidase activity IEP Predicted GO
BP GO:1901657 glycosyl compound metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR004367 Cyclin_C-dom 224 316
IPR006671 Cyclin_N 116 221
No external refs found!