Seita.9G001100.1

Description : subfamily ABCG transporter

Gene families : OG_42_0000055 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000055_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Setaria italica: Seita.9G001100.1
Cluster	HCAA Clusters: Cluster_183

Target	Alias	Description	ECC score	Gene Family Method
429390	No alias	pleiotropic drug resistance 12	0.06	Orthogroups_2024-Update
Bradi2g48620	No alias	pleiotropic drug resistance 1	0.03	Orthogroups_2024-Update
Glyma.03G192600	No alias	pleiotropic drug resistance 6	0.02	Orthogroups_2024-Update
Glyma.03G192700	No alias	pleiotropic drug resistance 11	0.02	Orthogroups_2024-Update
LOC_Os01g08260	No alias	pleiotropic drug resistance protein 4, putative, expressed	0.02	Orthogroups_2024-Update
LOC_Os08g29570	No alias	pleiotropic drug resistance protein 3, putative, expressed	0.02	Orthogroups_2024-Update
PSME_00010410-RA	No alias	(q8gu88\|pdr7_orysa : 1693.0) Putative pleiotropic drug...	0.04	Orthogroups_2024-Update
PSME_00013320-RA	No alias	(q8gu88\|pdr7_orysa : 1886.0) Putative pleiotropic drug...	0.02	Orthogroups_2024-Update
Potri.018G032900	No alias	pleiotropic drug resistance 12	0.02	Orthogroups_2024-Update
Seita.9G187800.1	No alias	subfamily ABCG transporter	0.03	Orthogroups_2024-Update
evm.model.tig00021489.3	No alias	(at3g21090 : 172.0) ABC-2 type transporter family...	0.01	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	16Dec
CC	GO:0005575	cellular_component	None	Extended
MF	GO:0008144	drug binding	None	Extended
CC	GO:0016020	membrane	IEA	16Dec
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0004812	aminoacyl-tRNA ligase activity	IEP	Predicted GO
BP	GO:0006418	tRNA aminoacylation for protein translation	IEP	Predicted GO
MF	GO:0016799	hydrolase activity, hydrolyzing N-glycosyl compounds	IEP	Predicted GO
MF	GO:0016875	ligase activity, forming carbon-oxygen bonds	IEP	Predicted GO
BP	GO:0040008	regulation of growth	IEP	Predicted GO
BP	GO:0043038	amino acid activation	IEP	Predicted GO
BP	GO:0043039	tRNA aminoacylation	IEP	Predicted GO
BP	GO:0045927	positive regulation of growth	IEP	Predicted GO
BP	GO:0048518	positive regulation of biological process	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR003439	ABC_transporter-like	184	365
IPR003439	ABC_transporter-like	870	1022
IPR013581	PDR_assoc	740	802
IPR029481	ABC_trans_N	112	161
IPR013525	ABC_2_trans	1168	1381
IPR013525	ABC_2_trans	520	732

External Links

No external refs found!