1. Home
  2. Species
  3. Setaria italica
  4. Sequence
  5. Seita.9G004300.1

Seita.9G004300.1


Description : Unknown function


Gene families : OG_42_0000884 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000884_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.9G004300.1
Cluster HCAA Clusters: Cluster_259

Target Alias Description ECC score Gene Family Method Actions
Glyma.10G261500 No alias Domain of unknown function (DUF303) 0.03 Orthogroups_2024-Update
HORVU4Hr1G085160.1 No alias Unknown function 0.05 Orthogroups_2024-Update
HORVU4Hr1G085200.3 No alias Unknown function 0.05 Orthogroups_2024-Update
Seita.9G004100.1 No alias Unknown function 0.05 Orthogroups_2024-Update
Sobic.001G005000.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sopen12g030540 No alias Domain of unknown function (DUF303) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004812 aminoacyl-tRNA ligase activity IEP Predicted GO
CC GO:0005737 cytoplasm IEP Predicted GO
BP GO:0006399 tRNA metabolic process IEP Predicted GO
BP GO:0006418 tRNA aminoacylation for protein translation IEP Predicted GO
MF GO:0016874 ligase activity IEP Predicted GO
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP Predicted GO
BP GO:0043038 amino acid activation IEP Predicted GO
BP GO:0043039 tRNA aminoacylation IEP Predicted GO
MF GO:0140101 catalytic activity, acting on a tRNA IEP Predicted GO
InterPro domains Description Start Stop
IPR005181 SASA 29 259
No external refs found!