1. Home
  2. Species
  3. Setaria italica
  4. Sequence
  5. Seita.9G011700.1

Seita.9G011700.1


Description : Unknown function


Gene families : OG_42_0000198 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000198_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.9G011700.1
Cluster HCAA Clusters: Cluster_67

Target Alias Description ECC score Gene Family Method Actions
Bradi1g52610 No alias Function unknown 0.04 Orthogroups_2024-Update
GRMZM2G011383 No alias Nucleotide-diphospho-sugar transferase family protein 0.04 Orthogroups_2024-Update
GRMZM2G313481 No alias Nucleotide-diphospho-sugar transferase family protein 0.07 Orthogroups_2024-Update
HORVU2Hr1G005990.1 No alias Unknown function 0.03 Orthogroups_2024-Update
HORVU3Hr1G094320.1 No alias Unknown function 0.03 Orthogroups_2024-Update
HORVU5Hr1G121600.4 No alias Unknown function 0.03 Orthogroups_2024-Update
PSME_00011093-RA No alias (at2g02061 : 287.0) Nucleotide-diphospho-sugar... 0.03 Orthogroups_2024-Update
PSME_00023225-RA No alias (at1g14590 : 301.0) Nucleotide-diphospho-sugar... 0.02 Orthogroups_2024-Update
PSME_00051181-RA No alias (at2g02061 : 306.0) Nucleotide-diphospho-sugar... 0.02 Orthogroups_2024-Update
Potri.012G037300 No alias Nucleotide-diphospho-sugar transferase family protein 0.03 Orthogroups_2024-Update
Seita.2G108100.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.002G257100.1 No alias Unknown function 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP Predicted GO
MF GO:0004518 nuclease activity IEP Predicted GO
MF GO:0004519 endonuclease activity IEP Predicted GO
MF GO:0004521 endoribonuclease activity IEP Predicted GO
MF GO:0004540 ribonuclease activity IEP Predicted GO
MF GO:0005215 transporter activity IEP Predicted GO
BP GO:0006810 transport IEP Predicted GO
BP GO:0007165 signal transduction IEP Predicted GO
MF GO:0008194 UDP-glycosyltransferase activity IEP Predicted GO
CC GO:0016020 membrane IEP Predicted GO
MF GO:0016740 transferase activity IEP Predicted GO
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Predicted GO
MF GO:0016780 phosphotransferase activity, for other substituted phosphate groups IEP Predicted GO
MF GO:0016846 carbon-sulfur lyase activity IEP Predicted GO
MF GO:0016892 endoribonuclease activity, producing 3'-phosphomonoesters IEP Predicted GO
MF GO:0016894 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 3'-phosphomonoesters IEP Predicted GO
MF GO:0022857 transmembrane transporter activity IEP Predicted GO
MF GO:0033897 ribonuclease T2 activity IEP Predicted GO
BP GO:0051179 localization IEP Predicted GO
BP GO:0051234 establishment of localization IEP Predicted GO
BP GO:0055085 transmembrane transport IEP Predicted GO
InterPro domains Description Start Stop
IPR005069 Nucl-diP-sugar_transferase 182 379
No external refs found!