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  5. Solyc03g112780

Solyc03g112780


Description : LOW QUALITY:F-box family protein (AHRD V3.3 *-* B9H429_POPTR)


Gene families : OG_42_0000263 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000263_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc03g112780
Cluster HCCA clusters: Cluster_164

Target Alias Description ECC score Gene Family Method Actions
Seita.4G273100.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Solyc08g082510 No alias LOW QUALITY:F-box protein (AHRD V3.3 *** W9RW78_9ROSA) 0.04 Orthogroups_2024-Update
Sopen04g025070 No alias Protein of unknown function (DUF295) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000775 chromosome, centromeric region IEP Predicted GO
MF GO:0003676 nucleic acid binding IEP Predicted GO
MF GO:0003723 RNA binding IEP Predicted GO
BP GO:0007049 cell cycle IEP Predicted GO
BP GO:0016567 protein ubiquitination IEP Predicted GO
BP GO:0032446 protein modification by small protein conjugation IEP Predicted GO
CC GO:0044427 chromosomal part IEP Predicted GO
CC GO:0098687 chromosomal region IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!