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  5. Seita.9G023900.1

Seita.9G023900.1


Description : Unknown function


Gene families : OG_42_0009842 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0009842_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.9G023900.1
Cluster HCAA Clusters: Cluster_33

Target Alias Description ECC score Gene Family Method Actions
At2g22410 No alias Pentatricopeptide repeat-containing protein At2g22410,... 0.04 Orthogroups_2024-Update
Bradi3g24690 No alias SLOW GROWTH 1 0.03 Orthogroups_2024-Update
Seita.9G255600.1 No alias Unknown function 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003774 motor activity IEP Predicted GO
MF GO:0003777 microtubule motor activity IEP Predicted GO
BP GO:0006928 movement of cell or subcellular component IEP Predicted GO
BP GO:0007017 microtubule-based process IEP Predicted GO
BP GO:0007018 microtubule-based movement IEP Predicted GO
MF GO:0008017 microtubule binding IEP Predicted GO
MF GO:0008270 zinc ion binding IEP Predicted GO
MF GO:0015631 tubulin binding IEP Predicted GO
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 370 419
IPR002885 Pentatricopeptide_repeat 269 297
IPR002885 Pentatricopeptide_repeat 241 263
IPR002885 Pentatricopeptide_repeat 184 213
IPR002885 Pentatricopeptide_repeat 302 328
IPR002885 Pentatricopeptide_repeat 445 470
No external refs found!