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  5. Seita.9G038500.1

Seita.9G038500.1


Description : E3 ubiquitin ligase


Gene families : OG_42_0002605 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002605_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.9G038500.1
Cluster HCAA Clusters: Cluster_227

Target Alias Description ECC score Gene Family Method Actions
271651 No alias RING/U-box superfamily protein 0.02 Orthogroups_2024-Update
Sobic.001G039600.1 No alias E3 ubiquitin ligase 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Predicted GO
MF GO:0003916 DNA topoisomerase activity IEP Predicted GO
MF GO:0003917 DNA topoisomerase type I activity IEP Predicted GO
MF GO:0005488 binding IEP Predicted GO
BP GO:0006265 DNA topological change IEP Predicted GO
BP GO:0006629 lipid metabolic process IEP Predicted GO
BP GO:0006914 autophagy IEP Predicted GO
MF GO:0043531 ADP binding IEP Predicted GO
BP GO:0061919 process utilizing autophagic mechanism IEP Predicted GO
BP GO:0071103 DNA conformation change IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!