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  5. Seita.9G045600.1

Seita.9G045600.1


Description : Unknown function


Gene families : OG_42_0000134 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000134_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.9G045600.1
Cluster HCAA Clusters: Cluster_200

Target Alias Description ECC score Gene Family Method Actions
At2g27880 No alias Protein argonaute 5 [Source:UniProtKB/Swiss-Prot;Acc:Q9SJK3] 0.03 Orthogroups_2024-Update
At5g21150 No alias Protein argonaute 9 [Source:UniProtKB/Swiss-Prot;Acc:Q84VQ0] 0.02 Orthogroups_2024-Update
Brara.C01682.1 No alias siRNA-integrating factor *(AGO) 0.04 Orthogroups_2024-Update
Glyma.05G011300 No alias Stabilizer of iron transporter SufD / Polynucleotidyl transferase 0.03 Orthogroups_2024-Update
Glyma.06G314500 No alias Argonaute family protein 0.03 Orthogroups_2024-Update
Kfl00272_0160 kfl00272_0160_v1.... (at5g43810 : 503.0) Encodes a member of the EIF2C... 0.02 Orthogroups_2024-Update
MA_594g0010 No alias (at1g48410 : 1189.0) Encodes an RNA Slicer that... 0.03 Orthogroups_2024-Update
Sobic.001G331800.1 No alias regulatory protein *(AGO7) of transacting siRNA pathway 0.03 Orthogroups_2024-Update
Sopen02g018440 No alias Piwi domain 0.02 Orthogroups_2024-Update
Sopen12g002750 No alias Piwi domain 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0004568 chitinase activity IEP Predicted GO
BP GO:0006022 aminoglycan metabolic process IEP Predicted GO
BP GO:0006026 aminoglycan catabolic process IEP Predicted GO
BP GO:0006030 chitin metabolic process IEP Predicted GO
BP GO:0006032 chitin catabolic process IEP Predicted GO
BP GO:0006040 amino sugar metabolic process IEP Predicted GO
BP GO:0016998 cell wall macromolecule catabolic process IEP Predicted GO
BP GO:0042737 drug catabolic process IEP Predicted GO
BP GO:0044036 cell wall macromolecule metabolic process IEP Predicted GO
BP GO:0046348 amino sugar catabolic process IEP Predicted GO
BP GO:1901071 glucosamine-containing compound metabolic process IEP Predicted GO
BP GO:1901072 glucosamine-containing compound catabolic process IEP Predicted GO
BP GO:1901136 carbohydrate derivative catabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR003165 Piwi 2 77
No external refs found!