1. Home
  2. Species
  3. Setaria italica
  4. Sequence
  5. Seita.9G049300.1

Seita.9G049300.1


Description : R-type component *(VAMP721/VAMP722) of SNARE cell-plate vesicle fusion complex & R-type VAMP7-group component of SNARE longin membrane fusion complex


Gene families : OG_42_0000264 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000264_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.9G049300.1
Cluster HCAA Clusters: Cluster_121

Target Alias Description ECC score Gene Family Method Actions
A4A49_03548 No alias vesicle-associated membrane protein 714 0.02 Orthogroups_2024-Update
At5g22360 No alias Vesicle-associated membrane protein 714... 0.03 Orthogroups_2024-Update
Brara.H01322.1 No alias R-type VAMP7-group component of SNARE longin membrane... 0.03 Orthogroups_2024-Update
Cre04.g224750 No alias vesicle-associated membrane protein 727 0.02 Orthogroups_2024-Update
Cre04.g225850 No alias vesicle-associated membrane protein 727 0.02 Orthogroups_2024-Update
GRMZM2G104505 No alias vesicle-associated membrane protein 726 0.03 Orthogroups_2024-Update
Glyma.12G091300 No alias vesicle-associated membrane protein 714 0.03 Orthogroups_2024-Update
Glyma.18G172300 No alias vesicle-associated membrane protein 726 0.05 Orthogroups_2024-Update
Glyma.20G076200 No alias vesicle-associated membrane protein 726 0.03 Orthogroups_2024-Update
Mp7g07410.1 No alias VAMP7-type R-type SNARE longin protein 0.02 Orthogroups_2024-Update
Solyc11g006780 No alias Vesicle-associated membrane protein, putative (AHRD V3.3... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003684 damaged DNA binding IEP Predicted GO
MF GO:0004190 aspartic-type endopeptidase activity IEP Predicted GO
BP GO:0005984 disaccharide metabolic process IEP Predicted GO
BP GO:0005991 trehalose metabolic process IEP Predicted GO
BP GO:0005992 trehalose biosynthetic process IEP Predicted GO
BP GO:0006289 nucleotide-excision repair IEP Predicted GO
BP GO:0009312 oligosaccharide biosynthetic process IEP Predicted GO
BP GO:0010498 proteasomal protein catabolic process IEP Predicted GO
MF GO:0016409 palmitoyltransferase activity IEP Predicted GO
MF GO:0016746 transferase activity, transferring acyl groups IEP Predicted GO
MF GO:0016747 transferase activity, transferring acyl groups other than amino-acyl groups IEP Predicted GO
BP GO:0030163 protein catabolic process IEP Predicted GO
BP GO:0043161 proteasome-mediated ubiquitin-dependent protein catabolic process IEP Predicted GO
BP GO:0046351 disaccharide biosynthetic process IEP Predicted GO
MF GO:0070001 aspartic-type peptidase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR010908 Longin_dom 32 111
No external refs found!