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  5. Seita.9G053900.1

Seita.9G053900.1


Description : B-G-class Rab-GDF protein


Gene families : OG_42_0000375 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000375_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.9G053900.1
Cluster HCAA Clusters: Cluster_213

Target Alias Description ECC score Gene Family Method Actions
Brara.E01509.1 No alias B-G-class Rab-GDF protein 0.02 Orthogroups_2024-Update
Glyma.02G261100 No alias prenylated RAB acceptor 1.B4 0.03 Orthogroups_2024-Update
Glyma.15G023400 No alias PRA1 (Prenylated rab acceptor) family protein 0.03 Orthogroups_2024-Update
Glyma.U031905 No alias prenylated RAB acceptor 1.B4 0.05 Orthogroups_2024-Update
HORVU3Hr1G088130.1 No alias B-G-class Rab-GDF protein 0.02 Orthogroups_2024-Update
Kfl00129_0090 kfl00129_0090_v1.... (at5g01640 : 136.0) prenylated RAB acceptor 1.B5... 0.02 Orthogroups_2024-Update
Potri.002G043800 No alias PRA1 (Prenylated rab acceptor) family protein 0.03 Orthogroups_2024-Update
Sopen06g016090 No alias PRA1 family protein 0.03 Orthogroups_2024-Update
evm.model.contig_2286.27 No alias no hits & (original description: no original description) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004175 endopeptidase activity IEP Predicted GO
MF GO:0004222 metalloendopeptidase activity IEP Predicted GO
MF GO:0004421 hydroxymethylglutaryl-CoA synthase activity IEP Predicted GO
BP GO:0006084 acetyl-CoA metabolic process IEP Predicted GO
BP GO:0006163 purine nucleotide metabolic process IEP Predicted GO
BP GO:0006637 acyl-CoA metabolic process IEP Predicted GO
BP GO:0006644 phospholipid metabolic process IEP Predicted GO
BP GO:0006720 isoprenoid metabolic process IEP Predicted GO
BP GO:0006721 terpenoid metabolic process IEP Predicted GO
BP GO:0006732 coenzyme metabolic process IEP Predicted GO
BP GO:0006753 nucleoside phosphate metabolic process IEP Predicted GO
BP GO:0006790 sulfur compound metabolic process IEP Predicted GO
MF GO:0008237 metallopeptidase activity IEP Predicted GO
BP GO:0008299 isoprenoid biosynthetic process IEP Predicted GO
BP GO:0008610 lipid biosynthetic process IEP Predicted GO
BP GO:0008654 phospholipid biosynthetic process IEP Predicted GO
BP GO:0009117 nucleotide metabolic process IEP Predicted GO
BP GO:0009150 purine ribonucleotide metabolic process IEP Predicted GO
BP GO:0009259 ribonucleotide metabolic process IEP Predicted GO
BP GO:0010142 farnesyl diphosphate biosynthetic process, mevalonate pathway IEP Predicted GO
BP GO:0016114 terpenoid biosynthetic process IEP Predicted GO
BP GO:0019693 ribose phosphate metabolic process IEP Predicted GO
CC GO:0031012 extracellular matrix IEP Predicted GO
BP GO:0033865 nucleoside bisphosphate metabolic process IEP Predicted GO
BP GO:0033875 ribonucleoside bisphosphate metabolic process IEP Predicted GO
BP GO:0034032 purine nucleoside bisphosphate metabolic process IEP Predicted GO
BP GO:0035383 thioester metabolic process IEP Predicted GO
CC GO:0044421 extracellular region part IEP Predicted GO
BP GO:0045337 farnesyl diphosphate biosynthetic process IEP Predicted GO
BP GO:0045338 farnesyl diphosphate metabolic process IEP Predicted GO
MF GO:0046912 transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer IEP Predicted GO
BP GO:0051186 cofactor metabolic process IEP Predicted GO
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP Predicted GO
BP GO:0072521 purine-containing compound metabolic process IEP Predicted GO
BP GO:0090407 organophosphate biosynthetic process IEP Predicted GO
BP GO:1902767 isoprenoid biosynthetic process via mevalonate IEP Predicted GO
InterPro domains Description Start Stop
IPR004895 Prenylated_rab_accept_PRA1 67 199
No external refs found!