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  5. Seita.9G054400.1

Seita.9G054400.1


Description : MYB class-R2R3 transcription factor


Gene families : OG_42_0000047 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000047_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.9G054400.1
Cluster HCAA Clusters: Cluster_16

Target Alias Description ECC score Gene Family Method Actions
A4A49_10535 No alias myb-related protein 3r-1 0.03 Orthogroups_2024-Update
A4A49_17304 No alias myb-related protein 3r-1 0.03 Orthogroups_2024-Update
A4A49_29942 No alias transcription factor myb44 0.03 Orthogroups_2024-Update
A4A49_36591 No alias transcription factor myb44 0.03 Orthogroups_2024-Update
A4A49_38114 No alias transcription factor myb44 0.04 Orthogroups_2024-Update
At3g09370 No alias Myb domain protein 3r-3 [Source:UniProtKB/TrEMBL;Acc:A0A1I9LSC6] 0.02 Orthogroups_2024-Update
At5g17800 No alias Transcription factor MYB56... 0.03 Orthogroups_2024-Update
At5g39700 No alias Myb domain protein 89 [Source:UniProtKB/TrEMBL;Acc:Q9SPG4] 0.03 Orthogroups_2024-Update
Bradi2g55303 No alias myb domain protein 98 0.02 Orthogroups_2024-Update
Bradi3g36740 No alias myb domain protein 105 0.03 Orthogroups_2024-Update
Brara.A00985.1 No alias MYB class-R2R3 transcription factor 0.03 Orthogroups_2024-Update
Brara.B02092.1 No alias MYB class-R2R3 subgroup-21 transcription factor 0.02 Orthogroups_2024-Update
Brara.B03351.1 No alias MYB class-R2R3 subgroup-21 transcription factor 0.02 Orthogroups_2024-Update
Brara.G01177.1 No alias MYB class-R2R3 subgroup-22/23 transcription factor 0.03 Orthogroups_2024-Update
Brara.H02151.1 No alias MYB class-R2R3 subgroup-21 transcription factor 0.02 Orthogroups_2024-Update
Brara.K01208.1 No alias MYB class-R2R3 subgroup-22/23 transcription factor 0.02 Orthogroups_2024-Update
Cre03.g197100 No alias myb domain protein 64 0.01 Orthogroups_2024-Update
GRMZM2G093660 No alias myb domain protein 73 0.02 Orthogroups_2024-Update
GRMZM2G369799 No alias myb domain protein 73 0.03 Orthogroups_2024-Update
Glyma.02G225700 No alias myb domain protein 119 0.04 Orthogroups_2024-Update
Glyma.02G253100 No alias myb domain protein 109 0.03 Orthogroups_2024-Update
Glyma.03G007500 No alias myb domain protein 117 0.04 Orthogroups_2024-Update
Glyma.09G169300 No alias myb domain protein 52 0.03 Orthogroups_2024-Update
Glyma.19G085700 No alias myb domain protein 52 0.04 Orthogroups_2024-Update
HORVU4Hr1G077230.1 No alias MYB class-R2R3 subgroup-22/23 transcription factor 0.03 Orthogroups_2024-Update
HORVU5Hr1G049880.1 No alias MYB class-R2R3 subgroup-22/23 transcription factor 0.04 Orthogroups_2024-Update
LOC_Os01g74590 No alias MYB family transcription factor, putative, expressed 0.03 Orthogroups_2024-Update
MA_4704g0010 No alias (at1g26780 : 223.0) Encodes LOF1 (LATERAL ORGAN... 0.03 Orthogroups_2024-Update
MA_89624g0010 No alias (at1g69560 : 166.0) Encodes LOF2 (LATERAL ORGAN... 0.03 Orthogroups_2024-Update
MA_89683g0010 No alias (at5g67300 : 191.0) Member of the R2R3 factor MYB gene... 0.03 Orthogroups_2024-Update
MA_9684426g0010 No alias (at4g37260 : 186.0) Member of the R2R3 factor gene... 0.03 Orthogroups_2024-Update
Potri.001G300200 No alias myb domain protein 73 0.02 Orthogroups_2024-Update
Potri.003G123800 No alias Homeodomain-like protein 0.02 Orthogroups_2024-Update
Potri.005G186400 No alias myb domain protein 52 0.02 Orthogroups_2024-Update
Potri.007G106100 No alias myb domain protein 69 0.05 Orthogroups_2024-Update
Potri.012G039400 No alias myb domain protein 52 0.03 Orthogroups_2024-Update
Potri.015G033600 No alias myb domain protein 52 0.03 Orthogroups_2024-Update
Potri.015G077700 No alias myb domain protein 98 0.02 Orthogroups_2024-Update
Potri.017G085200 No alias myb domain protein 105 0.02 Orthogroups_2024-Update
Seita.4G205800.1 No alias MYB class-R2R3 subgroup-22/23 transcription factor 0.03 Orthogroups_2024-Update
Seita.5G043800.1 No alias MYB class-R2R3 subgroup-21 transcription factor 0.08 Orthogroups_2024-Update
Sobic.009G083800.1 No alias R1R2R3-MYB transcription factor & mobile transcription... 0.03 Orthogroups_2024-Update
Sobic.009G103900.1 No alias MYB class-R2R3 subgroup-22/23 transcription factor 0.04 Orthogroups_2024-Update
Solyc05g007870 No alias R2R3MYB transcription factor 117 0.03 Orthogroups_2024-Update
Sopen03g028980 No alias Myb-like DNA-binding domain 0.03 Orthogroups_2024-Update
evm.model.contig_4410.19 No alias (at5g02320 : 122.0) Encodes a putative c-MYB-like... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003885 D-arabinono-1,4-lactone oxidase activity IEP Predicted GO
BP GO:0007049 cell cycle IEP Predicted GO
BP GO:0007062 sister chromatid cohesion IEP Predicted GO
BP GO:0007064 mitotic sister chromatid cohesion IEP Predicted GO
MF GO:0016717 oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water IEP Predicted GO
MF GO:0016899 oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor IEP Predicted GO
BP GO:0022402 cell cycle process IEP Predicted GO
CC GO:0031390 Ctf18 RFC-like complex IEP Predicted GO
BP GO:0051321 meiotic cell cycle IEP Predicted GO
BP GO:1903047 mitotic cell cycle process IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!